Report for 4273.m00255

 > 4273.m00255, length: 599, copies: 1 

MAKLLIEIAGSMGPAFRNAPHIGREMEKSHLIQLVSQNCENHHIISIWGMIGIGKTSFIRSVYESKEITSMFEQY

AWVTILHPFNLHDFVTSLAQELDAHDFSLLGNGVQKSEESIKASKRRCPLVLDDVLSIEEWSLIQPHLPNETNTK

IIVTTREASIAEHCSVTYKNIYKLEGLKEDAALALFKNKVFVDSSNTDLDLDMSTQAKLIIKECDGHPLAITNIA

GFLARKQKTASEWKKLNDDFSSGSYLKIQGRKVSSNNEGTIRHLSIIDVCETNKNALKQCADLTHVRSVTVFGEW

RSSLDFSMMRMLRILDLEGTSGLKDDDLDQIGIFLHLSYLSLRGCADIYKLPNSLGNLWDIQVLDVSGTRIIKLP

KTITKLKKLQYLCAGNVPKDDATSSIELKESSDLSKMVHEAIDDLEMPDFVAKSVQLGTTALDMTAAYCRKKMQN

TDNVKMRDIYHEYCKVKFPSILHGLDMYGVEAPEGIDQLNDLHTLGVVNVAAEKAILHDLEKLKKLHKLGLTGVN

KKNSQAVLSAIANLVLLHSLSLRSEGEPGLQGCLDHTFTPPSKLQSLKIYGNLVTLPTWITQIQNLTKLKLRST

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	4	320	3.3e-14
NB-ARC [Pfam fs]	22	240	2.3e-25
LRR [Pfam ls]	336	359	7.7
LRR [Pfam ls]	360	382	6.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	336	359	0.37
LRR [sensitive, ls]	336	359	7.7
LRR [sensitive, ls]	360	382	0.3
LRR [sensitive, ls]	360	382	6.3
LRR [sensitive, ls]	568	595	0.68
LRR [sensitive, ls]	568	595	14

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	3	247	7e-38
RPM1 [A. thaliana]	22	599	1e-22
I2 [L. esculentum]	23	241	8e-13
Xa1 [Oryza sativa]	23	271	1e-11
Mla1 [Hordeum vulgare].	24	248	1e-12
Pib [Oryza sativa].	24	189	9e-16
Pib [Oryza sativa].	264	599	9e-62

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4273.m00255

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)