Report for 4277.m00192

 > 4277.m00192, length: 607, copies: 2 

MRELRVAVLIIAVSLPSFSASDRQGDALYDMKQKLNVTGNQLSDWNQNQVNPCTWNSVICDNNNNVIQVTLAARG

FAGVLSPRIGELKYLTVLSLAGNRISGGIPEQFGNLSSLTSLDLEDNLLVGEIPASLGQLSKLQLLILSDNNFNG

SIPDSLAKISSLTDIRLAYNNLSGQIPGPLFQVARYNFSGNHLNCGTNFPHSCSTNMSYQSGSHSSKIGIVLGTV

GGVIGLLIVAALFLFCKGRRKSHLREVFVDVAGEDDRRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYK

GVLPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLKLIGFCTTQTERLLVYPFMQNLSVAYRLRDFKP

GEPVLNWPERKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGT

MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGSIVDRNLNQNY

DDEEVEMMIQIALLCTQSSPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQEYERMQRRFDWGEDSVYNQEA

IELSGGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	89	112	0.022
LRR [Pfam ls]	113	136	0.058
LRR [Pfam ls]	137	160	0.41
LRR [Pfam ls]	161	185	1.1
Ser/Thr pkinase [Pfam fs]	284	558	2.8e-45
Ser/Thr pkinase [Pfam ls]	284	560	1.7e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	89	112	0.001
LRR [sensitive, ls]	89	112	0.022
LRR [sensitive, ls]	113	136	0.0028
LRR [sensitive, ls]	113	136	0.058
LRR [sensitive, ls]	137	160	0.02
LRR [sensitive, ls]	137	160	0.41
LRR [sensitive, ls]	161	185	0.055
LRR [sensitive, ls]	161	185	1.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	7	188	8e-29
CLV2 [A. thaliana]	15	190	7e-13
FLS2 [A.thaliana]	30	569	3e-60
FLS2 [A.thaliana]	36	183	1e-11
FLS2 [A.thaliana]	42	193	3e-23
Xa21 [O. sativa]	43	183	3e-16
FLS2 [A.thaliana]	59	180	3e-15
FLS2 [A.thaliana]	62	219	8e-15
FLS2 [A.thaliana]	62	194	2e-13
FLS2 [A.thaliana]	62	176	9e-11
Xa21 [O. sativa]	62	366	2e-27
Xa21 [O. sativa]	62	177	2e-11
Xa21 [O. sativa]	62	190	8e-11
FLS2 [A.thaliana]	65	176	6e-14
Xa21 [O. sativa]	65	194	4e-14
CLV2 [A. thaliana]	66	211	5e-14
FLS2 [A.thaliana]	66	187	1e-11
FLS2 [A.thaliana]	69	181	6e-14
FLS2 [A.thaliana]	71	208	4e-14
FLS2 [A.thaliana]	71	193	2e-13
FLS2 [A.thaliana]	71	177	5e-12
FLS2 [A.thaliana]	72	193	3e-17
CLV2 [A. thaliana]	78	194	9e-11
Cf-9 [L. pimpinellifolium]	92	177	3e-11
Rpg1 [Hordeum vulgare]	270	566	4e-38
Pto [L. esculentum]	271	559	3e-50
Rpg1 [Hordeum vulgare]	277	565	6e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	218	240	in -> out

Report for 4277.m00192

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)