Report for 4338.m00146

 > 4338.m00146, length: 709, copies: 1 

MAEMVVIRPLVSLLKEKVSSYLVEQYKVMKGMEEQRDSLARKLPAILDVIEDAQKGASRPGVFKYEALRRDAKKK

GHYNKLGMDVISLFPSRNPIVFRYRMSKKLSKVVRTMDVLVRQMNDFGFTQRQQVTPSMQWRQTDSIMIDSDKDI

ASRSRNEEKEKIIKILVEQEGNGGLMVLPIVGMGGLGKTTFVQLIYNEPQVKEHFSLQRWCCVSDDFDIGNIARN

ICHSQEKNHEKALQDLQKELSGQRYLIVLDDVWNRDADKWGKLLTCLKQGGRGSTILTTTRDAEVARVMTMGVPG

AYNLEKLGNKYMKEIIQSRAFRVQKPNSDELDVIVDKIVDRCVGSPLAAKAFGSMLSTKTSMQEWKDILVKSNIC

NEKTEILPILKLSYDDLPPHMKQCFAFCALFPKDYPINVERLIQHWMAHDFIPAREEDNPDMVGKEIFNDLAWRS

FFQDVEQAPPPTGYYVRRPKFRYIMVCKIHDLMHDVALSVMGKECATIVNMPDMKSFINPTRHLFISYREIHTHL

DGMLKKQSPTLQTLLYTDPYTYVSPPRLSKHNSLRAMQLCRLRKLPIRPRHLQYIRYLNFSNNWWIKKLPEEISL

LYNLLTMDVSDCDSLCRLPNAMKYMKNLRHIYTGGCESLECMPPDLGQLTSLQTLTFFVVGSSSSCSNVSELENI

NLVGELELTGLENVTEAQAKAASLGSKEKLTHLL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	134	432	3.5e-64
NB-ARC [Pfam ls]	134	432	1.4e-64

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	678	1e-33
I2 [L. esculentum]	97	708	1e-72
Xa1 [Oryza sativa]	101	708	1e-56
Pib [Oryza sativa].	155	634	6e-26
Pi-ta [Oryza sativa]	155	608	1e-16
RPM1 [A. thaliana]	159	633	1e-40
N [N. glutinosa]	160	414	5e-13
RPS2 [A. thaliana]	160	705	4e-26
L6 [L. usitatissimum]	180	429	3e-11
M [L. usitatissimum]	180	406	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4338.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)