Report for 4356.m00181

 > 4356.m00181, length: 1387, copies: 1 

MADLVLGLAKTTVEGTVTMARSAMEEEEKLHKTVQRDLLVISDEFEMMHSFLNDAKGRVTDNVTRTLVRQVRNTA

LDVEDCIETIVYLDSKPHWWRRMILPWCMPSAAPGKDLDAAVANIEQLKARVEAMGHRNLRYNRIGDSGHKPEEQ

AHQQAVANAMAPTDAAKQSRQVDLVMLINRKGGQARHMLAPFPRSYFMAPSLTAGGGGGDEDDDDDDDNNNNEDD

DDNGDCYHDCCEEQLKVEKEVLQVISVWGTGSDLEMMSIKKAYDDTETMKSFNCRAWVKMVHPFHPIEFIRSLLA

QFHKNVCPEQDNTVKILDLMVATDDVLIEEFKQQLSQKFLVVLEDVTTMVDWEAVRGYLPDKKNGSCIVVHTRHH

GIACSCVGHPYRVSELEKFSADYSVRVVFKEDAAGKVEGTVNEETAHEREKSGPSCFGRDTDLSWLHSLTRLGGV

VSVWGMSGVGKSFLIRQFFNNYMRQSSKNTVTRNPYYDKKKFGWVDVPRPRPFDLRDLSKSLHSELNPAFKDEVM

STIKDPIQQCREYLQREENWPYLIVIDGLQSKEEWDSIRRNMDFKFNTSSGKSNRSGEKVGNVVIIITNEESVAN

YCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDFKGYFSLFFIREDVDLEVGDDEVGQEGGDGVNATDLGGNED

DIARELGGEEGLDVELPVEAELGAGADDHVGVAEEKEASEDGGADEAAVAGHEDLGTLVGEEGGVWTRKKEEQGR

KVAANQRQRLWPWDWESEENKMLEIKHRNDETRHILLQKCGGLPKVICAVAESLSMVGDIKEEDNLVSKLAATRS

LDDVFSWLLSYFRSCPDSLKPCILYLSIFPVNHTIRRRRLVRRWIAEGYFRDNKESTAEENGEGSFSKLIDLSMI

QAPRTRVDGRRRMPLCQVNGFVREYIVSQLVEENLVFELEGHCRKNIQRTGRHLAIDNSWDRDRNVFESIDLSLL

RSLTVFGKWETFIISDNMKLLRVLDLEDVSSGVTNVDVEKMVKLLPRLKFLSLRRCKQITRLPDSLGDLKQLQTL

DIRHTSVIKLPKSIIKLEKLQYVRAGTAKHQQASEAAENPSMAAAPAMMSRPCIATPGSRFSKLGLGLHCRHGSH

SGVKVPRGIGKLSSLHTLGVVNIQACGEDGILEDLKNLTQLHKLGVSGINRKNSEKLFSVILRLAHLESLSLKMQ

ANQDNEAAGCMADISSPLEKLQSLKLYGLVDRLPSWIMQMCLQLPRLEKLDLQMKTLPQQELDFILTLKYLRSLR

LRLAEFQDGELRFGWTIAQRSTSWIIDILEIVCNSSLQAVKFGSKIHVKILKIRCYSVSSSLQFSGLESMETLKE

VWLSGSYELGFKQQLETELKGNENEPILELEKPSSST

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	788	880	1.9e-12
LRR [Pfam ls]	1022	1045	0.47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	1022	1045	0.018
LRR [sensitive, ls]	1022	1045	0.47
LRR [sensitive, ls]	1046	1068	0.32
LRR [sensitive, ls]	1046	1068	8.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	47	627	1e-38
Pi-ta [Oryza sativa]	781	1171	4e-20
RPM1 [A. thaliana]	786	1353	3e-21
Mla1 [Hordeum vulgare].	786	1073	2e-18
Pib [Oryza sativa].	786	1354	1e-77

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4356.m00181

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)