Report for 4374.m00166

 > 4374.m00166, length: 583, copies: 1 

MSPHRGAAVASICAAFYDSIWLLVLLLSTALAAETLDGAQAASSQCQNATKCGGVDIVYPFGLSSSGCAMSPSFE

VDCNNTGNGVQKPFLGYVELLSIDVQLSQARVRTRISSSCYNISTREMNFDDLWYVDLKDTPYRFSDSANKFTII

GCRTLAYIADQDDVGKYMSGCVSVCRRGELTSLINGTCSGKGCCQTAIPKGLDYYQVWFEQSMNTSGIYNRTPCS

YAVLMEASNFSFSTTYLTSPFEFNNTYGGEAPVVLDWAINTANTCEEAMGNLTSYACKSDNAKCINSSDTTGYIC

RCQEGYQGNPYLKGPNGCQGVVASVLAVLFGFLGWEVIRHKQKIKRQALLRQTDEFFQQHGGQILLEMMKADGND

GFTLYKRGEIETATNNFSKAHVIGEGGQGTVYKAVIDGVAVAIKKCKEIDESRKMEFVQELVILCRVSHPNIVKL

LGCCLQFEAPMLVYEFVQNKTLQELLDLQRSRRFHVTLGTRLRIAAESADALSHLHSLPHPILHGDVKTANILLA

NGLVAKVSDFGCSTIDKRTQAVPKGTPGYIDPDYLVEYQLTTRNDVYSFGVILLELLT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	392	583	1.5e-36
Ser/Thr pkinase [Pfam ls]	392	583	6.9e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	371	582	7e-32
Rpg1 [Hordeum vulgare]	379	583	4e-26
Rpg1 [Hordeum vulgare]	383	582	2e-15
FLS2 [A.thaliana]	384	583	1e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 4374.m00166

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)