Report for 4405.m00127

 > 4405.m00127, length: 637, copies: 1 

MARRWPPLVVGLALLLLLSVAASSVVAKTDQPDVAALNVMFESMNKPSELLGWKASGGDPCEQQLVGAWIKRHAR

LSAIELEISNQIYSDVSKNNLNGEIPYQLPPNVVQLNLGKNQLSGQLTDMFSQLPKLTTMDLSFNSFSGNLPPSF

QYLKNLKTLDVESNQFSGHINVLAKLSLEDLNVKNNKFTGWIPSKLKSIDNLETGGNSWSSGPAPPGMEKESSAG

SSNGRDDSGINGFAIGAMVIAVLLAALILLSVLRRNHSSPVSSHYYTDESGRRNSSAVNMKSLEHSPSMGCKTPP

AVPRKSMSDNEFENKLNHSRRSTDPISLMNHSSSDLQAATGNFSSNRQLGQGTTGCVFRAKYADGRVLAVKKFDP

LSFSGSSDFMDTVNGIAKLRHTNISELVGYCSEPGHYMLVYDYHMNGSLYDFLHLSDDYSRPLTWDTRVRIAACT

AHALEYLHEVCSPPVLHKNIKSSNVLLDADLNPHLSDCGLSFFYEDASENLGPGYSAPECSRPSAYVMKSDVYSF

GVIMLELLTGRKPYDSSKPRTEQCLVKYVAPQLHDSDALGSLADPALRGLYPPKALSRFADCIALCVQADPEFRP

SMSEVVQSLLRCVQRTISNRGMAGYLSNSQRSDISDW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	107	130	4.1
LRR [Pfam ls]	131	154	0.044
LRR [Pfam ls]	155	177	1.2
Ser/Thr pkinase [Pfam fs]	343	611	9.7e-40
Ser/Thr pkinase [Pfam ls]	343	611	2.9e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	107	130	0.16
LRR [sensitive, ls]	107	130	4.1
LRR [sensitive, ls]	131	154	0.0017
LRR [sensitive, ls]	131	154	0.044
LRR [sensitive, ls]	155	177	0.045
LRR [sensitive, ls]	155	177	1.2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	80	611	5e-41
CLV2 [A. thaliana]	90	203	7e-11
Xa21 [O. sativa]	90	429	3e-13
Pto [L. esculentum]	335	609	4e-36
Rpg1 [Hordeum vulgare]	336	609	7e-23
Rpg1 [Hordeum vulgare]	336	609	1e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	out -> in
putative TM domain	235	257	in -> out

Report for 4405.m00127

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)