Report for 4406.m00150

 > 4406.m00150, length: 569, copies: 2 

MGTEPDPIQQDSPAPPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAA

PSPHSPSPSNAPWVAPAADIPPPPPPPPNPLPVIIAVTVPVCILFMAILLYVYVKCRRKRMALSTKHQHIKAAAT

HESEPNELRDAEAGALEPVASSAGPNHGKEYGGDPAAAAGPRQYEYGERVVSDGPRHGAAYNELVAAGPRLYEYG

ELAAATRDFAEEEKLGRGGFGSVYQGRLAGGVEVAIKKFSSDSSSQGRKQFEAEVKIISSLRHRNLVRLLGWCDS

SMGLLLVYELVQHGSLDKHIYNADKPLTWSERYKIILGLGSALRYLHEEWEQCVVHGDIKPSNIMLDSSYNTKLG

DFGLARLVDHDKGWQTTKAVLGTAGYIDPEFITTRRPSVQSDIYSFGIVLLEIVSGRPPVLLQEGAPPFMLLKWV

WSLYGRNAILDAADERLWAAGGGKEDDARQMERVLIVGLWCTQPDMADRPSIPQAMHVLQSDDAKLPDLWPQMYM

ASPSPAKNFAMGEYRLSGVSSFTSSGVPSSATSGTTRSSGSFAY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	234	434	9.7e-51
Ser/Thr pkinase [Pfam ls]	234	511	1.6e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	204	510	1e-38
Rpg1 [Hordeum vulgare]	220	511	7e-33
FLS2 [A.thaliana]	222	506	3e-31
Rpg1 [Hordeum vulgare]	222	513	3e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	107	129	out -> in

Report for 4406.m00150

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)