Report for 4424.m00144

 > 4424.m00144, length: 589, copies: 1 

MATAAALYLPSLTTLHIGRQAPSPVVAHLVPPPPPPGPLLPHLQPWRPPPPPRAASPWPPPPSPCIPVTVVTAAA

LSTPRRRTCAGRQLLSLKEGGGNGELPDDFEFDIHVDVTFANDRLRRAYVGLQALRQAIYSDPKNFTGGWVGADV

CSYFGITCAAALDDPAVTVVAGVDLNGGDIAGYLHRRARPHDRPRAVPRQLQPLLRRHPQELLAVALLHELDVSN

RALVGGFPEVVLDMAVLKYLDIRFNDFEGELPPQLFDKGLDAIFLNSNRFVGRIPDSIGGSTATVVVLANNHFVG

CIPRSVGRMKGTLNELLLLNNRLDGCIPPEIGELADAEVVDVGGNMLVGLLPEELAKMGKLEQLDVSRNLLAGAV

PEPVCKLPSLANFSFAYNYFSVEPPACVPAETAMVELDDKGNCLGGGRPEQKTSLECAPLLKRPIDCRTNTCSAL

PSSSKPAPKKITPTPPTLAPPPLISPKEETPSPSPYIEPPKSSPPPVKFPLPPVPFSTSTYGIPTTTCTSKLTAS

SCKVSSPTGACKFSTSTSTFTPTSFSNDLTASTSTFPTTTRLIPTATSRPIASATGTIVASSSP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	360	383	4.2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	241	261	0.64
LRR [sensitive, ls]	241	261	14
LRR [sensitive, ls]	264	287	1.6
LRR [sensitive, ls]	264	287	36
LRR [sensitive, ls]	312	335	1.8
LRR [sensitive, ls]	312	335	41
LRR [sensitive, ls]	336	359	3.1
LRR [sensitive, ls]	336	359	69
LRR [sensitive, ls]	360	383	0.19
LRR [sensitive, ls]	360	383	4.2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	127	436	2e-16
Cf-9 [L. pimpinellifolium]	173	393	5e-11
FLS2 [A.thaliana]	207	437	1e-20
FLS2 [A.thaliana]	209	430	3e-18
FLS2 [A.thaliana]	209	425	1e-15
FLS2 [A.thaliana]	209	400	1e-11
Xa21 [O. sativa]	209	445	2e-12
Xa21 [O. sativa]	209	425	5e-12
Xa21 [O. sativa]	215	400	3e-14
Xa21 [O. sativa]	218	436	7e-14
FLS2 [A.thaliana]	219	453	1e-11
CLV2 [A. thaliana]	221	428	7e-19
CLV2 [A. thaliana]	221	401	2e-16
FLS2 [A.thaliana]	228	424	8e-12
Xa21 [O. sativa]	270	424	3e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4424.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)