Report for 4451.m00201

 > 4451.m00201, length: 821, copies: 1 

MAEAVILFAVRKIGVALGNEATSQAVSYFRKFVTQLTELQGSMGRIRRELRLMHEFLCRMDVRNRNNQTYEIWVE

EGRVLVHGIEDIVDEYLHLIGQKLDTGWSTYLKKGIKGPNVVVSLNRIASLVKEAEVNLVHLFQAKDRWVLLPSD

SNDNSSYIVERSQHLAATSCSISDEDLVGIDDYRRDLEKWLEDDEPAHLVIALLGMGGLGKTALAANIYRRAKEK

FECHAWVSISQTYSRQGVLRNLIGKLFKDIEDVPTDIATMDITSLEEKLHLFLVEKKYLIVLDDVWSTEAFTDLS

NALVHNGTGSRLVITTRDSEVAGLASKNYVVELKTLPSDKAMELFCKKAFRSDTDDKCLAKLNDISVEIVSKCKG

LPLAIVSVGSLLFVQRFIVEKGESTLEEVAEGYLKELVHRNMLQLVQKNSFGRIRRFKMHDIVRELAVDLCRREC

FGITYEDGHHGRSLEENDERRLVIQKFHEDVGQSVLGVYRLRSIIVLDKSTPSSIILSSVLDNSRYMSVLELSGV

PIKTVPNAIDIRCLPRRIVKLKKLRHLFAEKLHDATWRNFRCCTGVRFHKGLGNLTSLRTLHGLEAQEESIRHLG

ELRQLRSLRVWNVKGAYSGRLCTSLVKLQFLSNLYIVASNENEALQLEEMNPPPPNLQRLFLRGRLADDILQEES

PLFHHAARRNLYELRLYWSQLEQDPLPSLSLLLNLTDLRLTNTYIGERLVFLSEWFPNLRILFLRDMRNLKWLVV

QKDAMKKLQRLTLVNLKNMRDVPLGIQFLMPLKYLGFLEITKEFLELLQSSSIKDFRWQHSLRDSETSVDI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	160	391	1.9e-52
NB-ARC [Pfam ls]	160	446	1.2e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	1	426	2e-43
I2 [L. esculentum]	12	418	4e-22
Mla1 [Hordeum vulgare].	48	650	2e-32
Pib [Oryza sativa].	52	367	1e-13
L6 [L. usitatissimum]	164	404	2e-19
M [L. usitatissimum]	164	404	6e-16
RPS2 [A. thaliana]	165	387	8e-12
N [N. glutinosa]	175	387	6e-14
Pi-ta [Oryza sativa]	177	380	1e-19
Pib [Oryza sativa].	191	387	1e-16
Xa1 [Oryza sativa]	200	648	6e-14
RPM1 [A. thaliana]	390	805	6e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4451.m00201

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)