Report for 4482.m00080

 > 4482.m00080, length: 634, copies: 1 

MLDASGNALTGGIPDALARCARLSHIALSGNRLSGPVPAWVGALPELGELALSGNELTGPVPVQLSNCSKLIKLS

LDGNQINGTVPSEIGSLVSLNVLNLAGNQLSGEIPATLAKLINLYELNLSRNLLSGPIPPDIGQLQELQSLLDLS

SNDLSGSIPASLGSLSKLESLNLSHNALAGAVPPQLAGMSSLVQLDLSSNQLQGRLGSEFSRWPRGAFAGNARLC

GHPLVSCGVGGGGRSALRSATIALVSAAVTLSVVLLVIVLVLIAVRRRRSGEVNCTAFSSSLGGGGNNTNGRQLV

VKGSARREFRWEAIMEATANLSDQFAIGSGGSGTVYRAELPTGETVAVKRIAHMDSDMLLHDKSFAREVKILGRV

RHRHLVKLLGFVASHDVGGGGGGGGSMLVYEYMENGSLYDWLHGIAAGGGGGGDGERKKRVLSWDARLKVAAGLA

QGVEYLHHDCVPRVVHRDIKSSNVLLDGDMEAHLGDFGLAKSVADNRKDFTDSASCFAGSYGYMAPECGYSLKTT

EKSDVYSMGIVMMELVTGLTPTDKAFGGDVDMVRWVQSRVEAPSPGREQVFDPALKPLAPREESSMTEVLEVALR

CTRTAPGERPTARQVSDLLLHVSLDYYRAGEHKR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	22	45	5
LRR [Pfam ls]	70	93	1.9
LRR [Pfam ls]	94	117	0.23
LRR [Pfam ls]	118	141	0.06
LRR [Pfam ls]	167	190	0.042
LRR [Pfam ls]	191	214	0.089
Ser/Thr pkinase [Pfam ls]	321	620	2.5e-53
Ser/Thr pkinase [Pfam fs]	327	620	5.5e-53

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	22	45	0.24
LRR [sensitive, ls]	22	45	5
LRR [sensitive, ls]	46	69	0.61
LRR [sensitive, ls]	46	69	13
LRR [sensitive, ls]	70	93	0.09
LRR [sensitive, ls]	70	93	1.9
LRR [sensitive, ls]	94	117	0.011
LRR [sensitive, ls]	94	117	0.23
LRR [sensitive, ls]	118	141	0.0029
LRR [sensitive, ls]	118	141	0.06
LRR [sensitive, ls]	142	166	2.9
LRR [sensitive, ls]	142	166	60
LRR [sensitive, ls]	167	190	0.002
LRR [sensitive, ls]	167	190	0.042
LRR [sensitive, ls]	191	214	0.0043
LRR [sensitive, ls]	191	214	0.089

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	1	233	3e-25
CLV2 [A. thaliana]	1	223	3e-29
CLV2 [A. thaliana]	1	206	2e-27
CLV2 [A. thaliana]	1	183	1e-24
CLV2 [A. thaliana]	1	214	8e-20
CLV2 [A. thaliana]	1	225	9e-18
FLS2 [A.thaliana]	1	622	7e-80
FLS2 [A.thaliana]	1	212	1e-36
FLS2 [A.thaliana]	1	212	7e-32
FLS2 [A.thaliana]	1	209	2e-29
FLS2 [A.thaliana]	1	209	2e-28
Xa21 [O. sativa]	1	134	6e-13
Xa21 [O. sativa]	1	212	4e-25
Cf-9 [L. pimpinellifolium]	2	202	3e-25
CLV2 [A. thaliana]	2	211	4e-22
CLV2 [A. thaliana]	2	206	9e-21
FLS2 [A.thaliana]	2	204	4e-31
FLS2 [A.thaliana]	2	209	5e-28
FLS2 [A.thaliana]	2	206	1e-27
FLS2 [A.thaliana]	2	206	9e-27
Xa21 [O. sativa]	2	418	7e-47
Xa21 [O. sativa]	2	254	9e-28
FLS2 [A.thaliana]	7	212	1e-27
FLS2 [A.thaliana]	7	209	2e-26
Xa21 [O. sativa]	7	206	1e-20
Xa21 [O. sativa]	7	214	1e-22
Cf-9 [L. pimpinellifolium]	9	211	1e-20
FLS2 [A.thaliana]	9	209	5e-29
Cf-9 [L. pimpinellifolium]	21	206	3e-18
Xa21 [O. sativa]	22	206	9e-28
FLS2 [A.thaliana]	26	209	1e-21
CLV2 [A. thaliana]	50	214	3e-15
Rpg1 [Hordeum vulgare]	306	615	2e-16
Rpg1 [Hordeum vulgare]	307	624	1e-29
Pto [L. esculentum]	309	615	2e-33

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	247	269	out -> in

Report for 4482.m00080

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)