Report for 4489.m00162

 > 4489.m00162, length: 1183, copies: 1 

MGPLLRKLDSLPVAPEIRLPEPLKDGIELLKEDLEEIGAALVEQSMVDSPSHRARYWMDEVRDLSYHIEDCIDTM

FSMRCGGDDGKPRSVRRHKVGRVKVDGFSKTQKPCTRLARIAELRALVREASERHERYQLGDGRASSSSSSSHRV

FTAHGQVPAPCRNLVGMDEPKTKLTNMLTDEAELHMKVVCILGSAGIGKTTLAEQVYRKLRWQFDCHAFVRASRK

PDMRRLLGAILSQVQLRIRISDTSTVQSLIDNLWEYLQKKRYFIVIDELYETATWDIITSAFPEDNNCSRIMTTA

GIEGVALECCSYHSVNIFKMIPLGLDDSAKLFFNRVFGSEQQCPYELNEVSYRITAKCGGLPLAVIIIAGLLASL

PCKTELWYNIDGCLCSSVTTDIDLDEILKEIISLGYDNLPHYLKTCLLYLSLYSEGFIIWTADLLKQWISEGFIA

VIDGEDIEEVAESYFYNLVNRGMIQSVKTKYNNQVLCTVHHTVFDLIIHKSKEEKFISAIDYSQTMPGNSLEARR

LSFHFSNTRYATEVADGIVLPDGIGCIRSLRTLKYFDLGSNSEENIRSLGQLTNLRDLHLTCSAPKSNQQAKRNL

VILASYTGKLGNLKSVKFSPGDSGMDISFLFYGIGISVDRSRTASSLPFSVRTLELPSICIFARLPDWIGQLRKL

HTLNLAVRELIENDIDSLAGLPDLIVLSMHIMKAPMERIVFNRKAFPVLKYFKFICGTLRMAFQAGAMANLHRLK

LGFNAHKGEKYDNILVGIEHLLNLKKIAVRIGGAAEAKESDRMAAEAALKEAIRKHLMFLDDLDIARVECVKEEY

KCIKKKHKIKIEDSISEKNGDSKKQHSVEKKAVWGKTMKNIADSGVFPEDYTMSREQRVAEGFVVGIEKCRAEDA

AERIIRNVPVDYDGLGQVSTSKIQDHLPELAPRAVQNEKFGSSNDLSIMIQINKYARLPSYEWRDTDISKLNFRL

LRAPMLLEAVTARCHLLDLILIGSNNITVLDLGRPTITKLPASIECLPNLRYLRLQGTQLKSLSEVIVKMPTIRG

LDIKNTKTEELPQGILRMKKLSHLSMGEKQKNIQVFMEKMQTLAETVQDSDDLSDETEGIADDEGEFSTRANAST

PKVDEDEVDRRANNFIARFRKQITIRNSGFAKKESSIDERLWIRDLDECQLSKRGGRF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	146	454	1.2e-32
NB-ARC [Pfam fs]	164	454	2.7e-34
LRR [Pfam ls]	1024	1046	0.39

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	557	581	5.7
LRR [sensitive, ls]	557	581	62
LRR [sensitive, ls]	674	697	5.8
LRR [sensitive, ls]	674	697	64
LRR [sensitive, ls]	1001	1023	2.1
LRR [sensitive, ls]	1001	1023	23
LRR [sensitive, ls]	1024	1046	0.035
LRR [sensitive, ls]	1024	1046	0.39

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	806	1e-122
Mla1 [Hordeum vulgare].	4	585	2e-71
I2 [L. esculentum]	24	496	1e-22
RPM1 [A. thaliana]	62	506	9e-35
Xa1 [Oryza sativa]	116	504	3e-21
RPS2 [A. thaliana]	147	465	2e-16
Pib [Oryza sativa].	164	511	2e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4489.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)