Report for 4490.m00120

 > 4490.m00120, length: 976, copies: 1 

MEAAILSGLLKILASRMLSLVDQKYNLYKGFKGDAEFLLKELRMIAGAIDEQLLRTVSRGSVLLLSIEELRDLAR

DIEDCVDRIMYQKTRDQQASLFSINSVTGTSKLQLAKEMKKLRKRADEAKERRERYTVVVGHQSSPVSSDEQRCS

GASDGRNLQADLVGIDLPREELLEHLKEAEPKKLKVISIVGFCGLGKTALARELYNNSGLGRSFSKQAWVSAAHG

DPSKVLREIIGQLVSNPPSDASVVDLDQLIVNLTDQLTNLRYFIVIDDMRKDLWSTIESAFPKDGFSSRIVVTTT

VQSVAKACSSANGYVYKIRRLDKIHSKKLFLKNACPVEYQDYIQPDSVRILKKCDGQALALLTVGQFLRKMGWPR

EPKCEDACNQLCNHLEDDDTLERMRQVLIHEYSTLSCHALKACLLYFGMFPSGHSIRRKRLLRRWSAEGFVEALP

SGSFPDPAVENFNKLMDRNIIQPIDLSSNEEVKTCQTYGMMREFILLKSISQDFIAVFGDKKLQYQHVRRLCLQN

NSAVDSSNLDIDLTLVRSLVVFGKAGKAILDFKKYQLLRVLDLEECTDLDDDHLIQVCNLFLLRYLSLGGKVTKL

PEEITKLKLLETLDLRRRKEVTINLSTEVIKLPYLINLLGKFKLLNKAKRLNELQKFLSENCRLQTLAGFSTDGS

EGFPELMGHMKQLRKVKVWCTELSASSSGFTNLQNAIQKFIHDEQNGFNDPRSLSLNFDNCPEDFLYEIKAPCYL

RSLKLHAKLLESPKFVVLLRGLQELCISSSATKLTTGLLSALSNLRKLKYLKLIADQLEEFIIKDNALPSLLSLC

FVLNRPTFPVIKGNALRFLKSLQLLCKNLVGLSEININCLKRLEEVVLHPCVNKATKVTWERAAKEHPNRPKVLV

LEKVDLADGHEEDSDSTPTEIVTNKESTVAGNGADIDKQNYIDKQNYPTSNMSRAMVSPALTEPCSAGNGVESSC

A

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	153	451	4.4e-19
NB-ARC [Pfam fs]	159	451	8.5e-21

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	4	617	8e-26
Mla1 [Hordeum vulgare].	5	615	6e-65
RPM1 [A. thaliana]	16	636	6e-42
Pib [Oryza sativa].	67	348	9e-14
Pi-ta [Oryza sativa]	68	618	2e-57
RPS2 [A. thaliana]	87	617	3e-17
Pib [Oryza sativa].	109	663	5e-46
Xa1 [Oryza sativa]	184	692	2e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	105	133

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4490.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)