Report for 4490.m00130

 > 4490.m00130, length: 781, copies: 1 

MAEAVILAISKIGTTLGEEATKAVLAKLSEKVTNLKNLPRNVKDLMKWSLSAELMSPKTPSDIERQISGGCLPEF

IKDEDLVGVEENRRKLTGWLYSNEPHGTVITVSGMGGLGKTTLVKNVYDREKGNFPAHAWIVVSKTYDVEELLCT

LLMKVAYREQSPAANMNKMDVYELTDKIKKKLEDSKCLIVLDDVWDHEAYTMMRNAFQNLQESRIVITTRKEEVA

ALASSKYRLDLQPLGNTDSFNLFCRRAFHGRTGCPKDLMEVATSIVKRCQGLPLAIVSMGSLLSSRKQTEYAWNQ

TYSQLRNEMIKNDHVRAILNLSYHDMPGDLRNCFLYCSMFPEDYSMSRESLVRLWVAQGFVVRKDGNKPEDVAEG

NLMELIHRNMLEVVENDELSRVSTCKMHDIVRNLALDVAKEEMFGSASDNGTMTQLDTEVRRFSTCGWKDDSAPR

VSFPHLRTLLSLQAVSSSTSMLNSIFSRSNYLSVLELQDSEISEVPTSIGNLFNLRYIGLRRTNVCKLPECIENL

SNLQTLDIKQTKIVKLPRGIVKVKKLRHLIADRYADEKRTEFRYFIGVEAPKGLSGLEELQTLETVQASKELAEQ

LEKLTKLQNLWIDNISATNCAKIFTALSKMPLLSSLLLSACDEKEEHGKNLRYLALSWCQLGEDPLRVLGLHVPN

LTYLRLNSMISANRLIITAGSFPKLKTIVLKLMPNVNRLKIADDALPVIEGLYNDSLPGLERVPVGIENLFSLKK

LWLLNLHQDFKADWIHREMHRKMQHVPDLRV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	62	366	1e-77
NB-ARC [Pfam ls]	62	366	2.8e-78

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	481	503	1
LRR [sensitive, ls]	481	503	11
LRR [sensitive, ls]	504	526	0.51
LRR [sensitive, ls]	504	526	5.6
LRR [sensitive, ls]	527	550	0.53
LRR [sensitive, ls]	527	550	5.8
LRR [sensitive, ls]	650	673	2.4
LRR [sensitive, ls]	650	673	27

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	28	756	2e-95
L6 [L. usitatissimum]	30	417	4e-20
M [L. usitatissimum]	76	417	2e-16
Pib [Oryza sativa].	77	561	2e-57
I2 [L. esculentum]	78	559	6e-51
RPP5 [A. thaliana]	79	613	8e-11
Pi-ta [Oryza sativa]	81	554	3e-42
Xa1 [Oryza sativa]	95	658	4e-32
RPS2 [A. thaliana]	97	715	1e-41
Mla1 [Hordeum vulgare].	105	554	6e-52

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4490.m00130

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)