Report for 4490.m00131

 > 4490.m00131, length: 913, copies: 1 

MAEAVLLAISKISTALGDEATRAVIAKLSGKVSNLRELPDKVEYIRRELRLMKDVIQDLDSTNTNMNVVKGWIDE

LRKLAYRVEDIMDKYSYYACQRQQEGSVMRCVRGAHYAGVFSEVASEVMKIKGDVEQVKRQQMEWLPTVQLISRT

PTDIETPRSQGRRKLLECGDPVGIEYNRKRLLELLYPEEPGHKVITVSGMGGLGKTTLALDVFEREKIKFPVHAW

ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTENCTSCLIVLDDVWDQNVYFEIQG

MLKNPQASRIIITTRMEHVAVLAPSECHLKIQALGEIDAFNLFCRRAFYNTKDHRCPLDLENVAASIVSKCKGLP

LALVTMGGLMSTKLQTEHAWQQMYNQLRSELAKNDDVKAILKVSYHALPADQKNCFLYCSLFPEDFRISRESLVR

YWVAEGFAVRIEHNRPEDVAEINLMELIHRNMLEVDEYDELGKVISCKMHDIVRNLALSIAGQERFGYANDYGAV

EKVDWEVRRLSLFLNNGKGCASTVKFPHLRTLLETTTHPPGLLSSILSESKYLTVLELQDSDITEVPACIGKLFN

LRYIGLRRTRLCSLPESIDKLSNLQTLDIKQTKIEKLPRGITKIKKLRHLLADRYEDENKSEFRYFIGVQAPKYL

SKLEELQTLETVEASKDLAEQLKELMQIRSIWIDNISSADCGNIFATLSNMPLLSSLLLSAKDENEPLCFEALQP

ISNELHRLIIRGQWAKGTLDYPIFHSHGTYLKYLALSWCHLGEDPLGMLASHLSNLTYLRLNNMHSSKTLVLDAE

AFPHLKTLVLMHMPDVNQINITDGALPCIEGLYIVSLRKLDKVPQGIESLASLKKLCLMDLHKDFKTQWNGDVMH

QKMLHIAEIHVGW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	153	463	8.5e-64
NB-ARC [Pfam ls]	153	463	3.6e-64
LRR [Pfam ls]	600	622	2.9
LRR [Pfam ls]	623	645	4.8

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	577	599	0.66
LRR [sensitive, ls]	577	599	7.2
LRR [sensitive, ls]	600	622	0.26
LRR [sensitive, ls]	600	622	2.9
LRR [sensitive, ls]	623	645	0.44
LRR [sensitive, ls]	623	645	4.8
LRR [sensitive, ls]	780	807	1.9
LRR [sensitive, ls]	780	807	21

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	12	909	3e-98
Mla1 [Hordeum vulgare].	28	650	4e-47
I2 [L. esculentum]	29	684	2e-49
Pi-ta [Oryza sativa]	72	706	1e-40
N [N. glutinosa]	125	544	7e-15
L6 [L. usitatissimum]	165	514	6e-18
M [L. usitatissimum]	165	887	1e-20
Xa1 [Oryza sativa]	171	866	3e-33
RPS2 [A. thaliana]	172	869	6e-38
Pib [Oryza sativa].	193	657	2e-51

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4490.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)