Report for 4497.m00194

 > 4497.m00194, length: 974, copies: 1 

MKKSLQKSLRDPMVKSFDQGLPRIVFFIVTIYTINREQKNVILNVSMSQWEAAFVVTLSLLFCIHGQLDNLGFIS

IDCGYITRPSYPDFKTNLTYVADVGFTNTGFIHTVDVGNLQRDLAQRYTTVRYFPNGTRNCYTLKQLTRGGKYLV

RATFGYGNYDAFNSPPAFDLYLGANYWVKVNITNSSRAYVHETIAVSPSEFLQVCLVNTGSGTPFISGLDLRPMW

HNVAQSLVLLSFFRETVSFGFNRFHFGTDEHHIRYPVDRYDRFWQRYEDIPGWEDVPDKINGTVKSPQNDTYGAP

SDLMRSASTAVNASRMDLPWSSDASMDVGIGPEYIVVLYFAEVQAISDNLLRQFLVSVDNTPLAAAFSPRHMLAD

VFSGTVLGSDQHSISLITTIISDLPPLISAMEIFLGRTLNESSTGSSDAIAMMTIQTKYSVKRNWEGDPCAPEAF

VWDGLSCIHTSIGDIQYNPRGLHRITALNLSFSELIGDIDASFGQLLLLRHLDLSYNNLSGSIPDFLGQMPLLTF

LTGNNPNLCGNHTCDPISNKNKRNKFIGFVIAAAIVATVFALSLSALFIWYRRRKTNPDVLPEADPYKSRRFKYK

ELQVITNDWRNVIGEGGFGHVYAGQLEDVTDVAVKVESQTSLRGNHKQFLAEVQHLTRVHHKNLVSLIGYCNDKK

HRCLVYEYMDGGTLEGRLRGREDPPEPPLTWLQRVNIALGSANGLNYLHTMCSPRLIHRDVKAGNILLTANLEAK

ISDFGLTRPSIHGTVETRTITQLAGTPGYMDPESLQASHPSESNDVYSFGVVLMVVITGRTAIVTINGTEKNLAQ

CVRDWLSSGRGIEAIADPMIRDDCNLSSVEMVAQLALDCTEPAGQDRPTMADVVTTLTESLQLEMSWSSPHSMRS

STTISSSAGFTGSGRADHDAAADSIAVLQVEQAVVETSTRGFTILDRAPRSQTLDELMNTGSEFSIHGQYVWLP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	498	521	0.0038
Ser/Thr pkinase [Pfam ls]	605	879	1.5e-39
Ser/Thr pkinase [Pfam fs]	612	813	3.1e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	474	497	0.67
LRR [sensitive, ls]	474	497	18
LRR [sensitive, ls]	498	521	0.00014
LRR [sensitive, ls]	498	521	0.0038

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	470	882	5e-41
Xa21 [O. sativa]	485	711	2e-15
Pto [L. esculentum]	580	891	1e-50
Rpg1 [Hordeum vulgare]	590	883	2e-32
Rpg1 [Hordeum vulgare]	612	879	3e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	554	576	out -> in

Report for 4497.m00194

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)