Report for 4499.m00188

 > 4499.m00188, length: 538, copies: 1 

MSPPPAAARAPPVLRNELSRRTAVLGLRLWVLVGIAVGAAFLLLLAVISFHLAQARRRKPAAKRASSAAAAAAAP

GGAAVPLSPATIPPVSKEIQEVAVHVGSLRHYLEAGATFLKEGGGVGGAVVDGDSLGGSTVYGSQRVHIEAGKGR

RMVAYADGEVGPVASDLAASAQAAVGVGVGPEVSHLGWGHWYTLRELEEATAAFAPEHVVGEGGYGIVYRGVLAD

GCEVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILVYEYVDNGNLEQWLHGDVGPVSPLS

WDIRMNIVLGTAKGITYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSDNNYVTTRVMGTFGYVAP

EYASTGMLNERSDVYSFGILIMEIISGRSPVDYARAPGEVNLVEWLKNMVSNRDYEAVLDPKLPEKPTSKALKKA

LLVALRCVDPDSQKRPKMGHVIHMLEVDDFPYREIILYVHGSSDSAGEPTGQNKNICEAGDGVGRRGQHHHSCQY

AIQIARELEIGLT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	204	405	1.5e-47
Ser/Thr pkinase [Pfam ls]	204	477	1.2e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	189	475	3e-39
Pto [L. esculentum]	192	476	8e-59
Rpg1 [Hordeum vulgare]	192	479	4e-33
FLS2 [A.thaliana]	195	477	2e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	29	51	in -> out

Report for 4499.m00188

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)