Report for 4537.m00127

 > 4537.m00127, length: 848, copies: 1 

MATVIVILLLLPLLPSTALAAFPYFLACGAASNVSFPGDSPARTFVPDAPFLSSAGRVPAVTSTGSNTIPPLYAA

ARAAGSGFSYSFADPDTATVNVSRVLRLHFFPFTSSSSVNLSSASFSVSVRDAYTLLSSFSPPRDGVVKEYFVPG

DGSGEFRVKFTPDAGSTAFVSAIELFPAPPELLWRRPVKPVGALVDSVDVNAWPQQALETVYRLNVGGSKVTAAN

DTLWRTWLPDDPYFSSPRGLSQVNSTSTPIIYGTSIGYTREVAPDSVYKTQRAMNMASQQLFLTPGPFNLTWTFA

LPPPAPGSDSDYLVRLHWCDYSLVSSVVATGIVFDVYVAQRLASKDLDRNAADAAEQPNEAFYLDYAATAPTTGN

LTISIGKSDKSDAGGMLNGLEIMKLRRADNLNSAGSHGRRKKILIGTLSAALGVAVLACALLCLLAVLRRRRQAP

TPAPEEKESTQLPWSQHTQDGSSWVDMSNASGAGMTGGLHRMSMQLNISLADITAATENFNERNLIGVGGFGNVY

SGVLRDGTRVAVKRAMRASKQGLPEFQTEIEVLSRIRHRHLVSLIGYCNEQSEMILVYEYMEKGTLRSHLYGSEE

PPLSWKQRLEICIGAARGLHYLHTGYSENIIHRDVKSTNILLGDAFIAKVADFGLSRIGPSFGETHVSTAVKGSF

GYLDPEYFKTQQLTDRSDVYSFGVVLFEVLCARTVIDQSLERDEINLAEWAVSLQQKGELAKITDPRIAGQVNGN

SLRKFAETAEKCLADYGLDRPSMGDVLWNLEYCLQLQETHVNRDAFEDSGAVATQFPADVVVPRWVPSSTSFLMD

DSVTDSGIANSKAFSQLSSGDGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	510	706	1.3e-44
Ser/Thr pkinase [Pfam ls]	510	779	2.7e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	500	789	6e-99
FLS2 [A.thaliana]	502	780	4e-36
Rpg1 [Hordeum vulgare]	503	847	1e-29
Rpg1 [Hordeum vulgare]	507	793	6e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	418	440	out -> in

Report for 4537.m00127

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)