Report for 4556.m00124

 > 4556.m00124, length: 771, copies: 1 

MSPHRGAAVASICAAFYDSIWLLVLLLSTALAAETLDGAQAASSQCQNATKCGGVDIVYPFGLSSSGCAMSPSFE

VDCNNTGNGVQKPFLGYVELLSIDVQLSQARVRTRISSSCYNISTREMNFDDLWYVDLKDTPYRFSDSANKFTII

GCRTLAYIADQDDVGKYMSGCVSVCRRGELTSLINGTCSGKGCCQTAIPKGLDYYQVWFEQSMNTSGIYNRTPCS

YAVLMEASNFSFSTTYLTSPFEFNNTYGGEAPVVLDWAINTANTCEEAMGNLTSYACKSDNAKCINSSDTTGYIC

RCQEGYQGNPYLKGPNGCQGEIVAYLFRNFEAKFQSLILTLTDTPNVAVAFKILMNVNMERITLAMEIATINLEV

SIVCVMRVVVEMRQFKEDAEKTSYHRKHDWQLALLRQTDEFFQQHGGQILLEMMKADGNDGFTLYKRGEIETATN

NFSKAHVIGEGGQGTVYKAVIDGVAVAIKKCKEIDESRKMEFVQELVILCRVSHPNIVKLLGCCLQFEAPMLVYE

FVQNKTLQELLDLQRSRRFHVTLGTRLRIAAESADALSHLHSLPHPILHGDVKTANILLANGLVAKVSDFGCSTI

DKRTQAVPKGTPGYIDPDYLVEYQLTTRNDVYSFGVILLELLTGRRPLSKERKSLTLMFQEARSNGTLIELLDSD

IVDETSMRVIKRAADLVSQCLVVPGTTRPSMTLVAAELRRLAEADEVKRSPQPPLVLEDLRFMDMGSTTNTLYGE

SRTSGAYSLEKKAVLSIEFAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	452	707	1.2e-38
Ser/Thr pkinase [Pfam ls]	452	709	2e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	431	706	4e-39
Rpg1 [Hordeum vulgare]	439	726	4e-29
Rpg1 [Hordeum vulgare]	443	725	1e-17
FLS2 [A.thaliana]	444	716	4e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out

Report for 4556.m00124

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)