Report for 4613.m00143

 > 4613.m00143, length: 1096, copies: 1 

MESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYCQHDGIHKYILIDVGK

TFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGCRNGLGKVPIFLTHFTMNSVAARFPYLLKNK

LEEGDEGSQVIQLDWTIIEGDIDKPFVSSGLEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRTEHAIS

KSGAGQLDLLILETNELHGEGDAGSCHLTLSQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAEWSSSEIIVEH

FRIIPFACFKRKRKFHLLSSSSGVSSAAAAGRAISLPGCPDKCGDVSIPYPFGVGDRCAAVGLNPYFNITCDDAV

RPPVPKLGDPGMEAEVLDITLERGEIRLTGFLSYVCYTSSNSSYASLPGGIFVGGTQLRVSPSRNQLTVIGCRAL

GLLVGGAHAGGSGDGDEYATGCYTYCASLNSTDADGAPCAGTGCCQAPISSDLAYVGGTFPSNWTNSGWRFNPCF

YALIAEVGWYSFRRRHLAGVLGFVNETKPSDIPVVLDWAARDGWCPATAEEKARRKYACVSGNSHCVNSSNGMGY

SCSCNQGYEGNPYLDNGCQDIDECTLRRQGRQYEDVYPCKHGICINTPGSYRCKCKAGTKPDGTNFGCQQVLPMA

AKVIIGLSACSIFVMALSCMLVIQLQRRKHTIEKQEYFRRNGGLRLYDEMVSRQVDTVRVLTVDELKKATDNFSD

ARVLGRGGHGTVYRGTLDDLREVAIKRSKAAVDGDGDGGGCKEEFVNEIIVLSQINHRHVVRLLGCCLEVHVPML

VYEFVPNGTLFDLLHGGTAARRRPVSLGLRLKIAAQSAEALAYLHSSASRAILHGDVKSLNILLDGALDAKVADF

GASALRSAMGEGESFIEYVQGTLGYLDPESFVSRHLTDKSDVYSFGVVLAELITRKKAVYEDDGGGGGGSGEKRS

LSSTFLAASSRGELWRVVDRDIMDGDDVDAVVRELARVAEECMGARGEERPAMKEVAERLQVLRRVEMMEAAAGV

EVVDGFNGGGLVGRHGHLDTTTTTTTSYYQSMETDKLQLDVDDLVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	748	955	1e-39
Ser/Thr pkinase [Pfam ls]	748	1037	2.5e-35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	734	957	5e-21
Rpg1 [Hordeum vulgare]	737	958	2e-18
Pto [L. esculentum]	738	1042	5e-40
FLS2 [A.thaliana]	740	1039	2e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	678	700	out -> in

Report for 4613.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)