Report for 4636.m00126

 > 4636.m00126, length: 725, copies: 2 

MHLAGGRLLLLLCVGVQFLLILPYGALSASPAAAATGGDERCRRKCGGLDVPYPFGFSGDCPILLACDEGNSTAA

LLRPTNGTSTTMEPLSYAVVGKSFNSTASTFVVSLLPSCNRTVSDARLWLTGANYGVSSSTGLFVRGCQNAKNNS

CSVPAEAMSSMLTTAKCGGGGGGNGTASSPVTCIPTMSTEADMAKGVGLFAQWDKVEEPRCDNLLTSVYGETTND

GVFTLEIAVAEMGWWVNGNCSNHSAAAADLVGLCAANATCHDVRTPSGAWGHQCRCLEGMDGDGFAAGEGCHFPA

KKSSTKKILIIVGGVLAGTVAAGVLFLCCARCRRSGGGGGRSGFDRLAAKRLLSEAASSSGVPVYSYHEVARATN

SFSHTHRLGTGAYGTVYVGKLPASSPSLVAIKRMRRRHDDGDDDAAVAVLLNEVKLISSLSHPGLVRLLGCCLDR

GEQILVYEFVPNGTLAHHLAGGGLPWRARLGVAAETAAAIAYLHAKRPPILHRDVKSSNILLDGDLRPRLADFGL

SRAVGRLDQASLSHVSTAPQGTPGYLDPEYHQNFHLSDKSDVYSFGVVLLELITAMKVVDFARPAAEVNLASLAL

DRIGKGRVDDIVDPALVDRADEWVMRSVRHVSELAFRCLAFQKDVRPAMSEVAAELARIRDAAPASVPGARTGAG

SRPPMVIDVGVGFDGVDAAVKKVGSPVSVQDVWVSDQSSPSTNGSMPRFA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	377	579	9.2e-48
Ser/Thr pkinase [Pfam ls]	377	652	5.1e-39

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	305	663	8e-30
Pto [L. esculentum]	349	656	3e-49
Rpg1 [Hordeum vulgare]	365	685	5e-23
Rpg1 [Hordeum vulgare]	374	659	2e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	out -> in
putative TM domain	308	330	in -> out

Report for 4636.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)