Report for 4645.m00134

 > 4645.m00134, length: 1524, copies: 1 

MEFTVSAARWVVGRALGPVTGELMEAWAASKKLGPNIRELKLLLLHAQAMLENAEGRDIRNGALDQLLSQLRDLA

YDADDVLDELDYFRIQDELDGTYEAVDDAEEERGLVRGLALHARHTARAIARKLKCTCSASARSHADAEEGRCLP

ATAVGKLLPCCSPPTVHNDDAAGAKTNEQHLQAPKLKFVRVEMSKKMSEIVEQLKPVCDAVDRILGPLQPSGHSK

NAKTQCIDLEKRPKTTPTIIEHELFGRKDLKRIVADEIMIGKYRDNDITVLPIVGPGGIGKTTFTQHIYEEVKNH

FQISVWICVSQNFNANVLAKEIVEKMPKGNNEKENESDQEKIEKRIQSQQFLLVLDDVWEYHEDEWKTLLAPFRK

SGTKGNMVIVTTRKQKIAKMVESTDCSIKLDRLDHEDSMRLFQACVFDNNKTWEDYPSGLQKVGVDIVDRLKGFP

LAIKTVGRLLRNKLTLDRWTRVYESKEWELQPNDDDIMPVLKLSYNYLPFHLQQCFSYCALFPEDYRFCGQELIN

LWIGLGLLGTDDQNKTMEYLGLEYLDQLVDNGFFEQVGKEHDSPYVMHDLLHELATNISSHEIRCLNSSTLSSIN

EIPKSIRHMSIIVDNRHVENRIAFENHKKDLSTLGNKLKAGNLRTIMLFGEYHGCFYKIFGDVLIDAKSLRVIFL

SGASYDVGDVLCNFSELVHLRYLRIKDSRMCGASLPNSITRFYHLLVLDLQEHYGELGFPRDMGNLLKLRHFLVH

DDNIHSSIFEVGKLNFLHELRKFEVKREMKGFDLEQIGRLLVLRGSLGIYNLEKVEGIKEANDAKLAYLNHLDSL

VLDWDNERCNRDPIREGNVLENLKPHDNIRELHIAGHGGVSCPNWLSGDLSIRNLESLLIKYVNWDTFPLPGKLY

MTEGQERQGSVTSHDFHNLKRLELVNIQKLKRWHGDGTINLLPHLQSLTISDCPELTELPLSDSTSCQFQQSTIC

FPKLQKIKISECPKLLSFPPIPWTNSLLYVSIQGVDSGLEMLNYSKDESSLYITGKDAPGSMFWNMLDFNNLTEL

QEMNITKCPPISLDHLKMLTCLKTLQITDSGSILLPVDCENYVQYNLPVEKLIIRSCGTRGRELTHVLSHLPKLS

TLLIWKCQNVARLGVAEQRTITTPESSLSPSANKAAKTLTTIPQQQTGEAEEMETATADDGLLLLHPQIKVFEIS

ECRELSLDSGGIQGLLSLQTLGIYDCPKLLCSSSSSYSPFPTSLQTLQLWNVEGMETLPSPLPNLTFLYISHCGN

LRGGEVLCNLLAQGNLTSLYVHKTPNFFLGLEHSCSQVDKQEDVHRSWRLQELSTDDFARVLATPVCHLLSSSLT

KLDLRWNDEVECFTKEQEKALHILTSIEDLEFSRCKKLQSLPTGLSEIPNIKTLGIYGCLAISSLGNLPNSLQQL

EISSCPAISSLGNLPNSLQRLGISYCPAISSLGNLPNSLQQLEISSCPAISSLDGTTIRSLAKDRLPTTLREIDV

RYCGNEELKRQCRKLQGTIPIVKA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	232	538	1.7e-71
NB-ARC [Pfam ls]	232	538	4.8e-72
LRR [Pfam ls]	944	968	5.2
LRR [Pfam ls]	1463	1487	4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	944	968	0.23
LRR [sensitive, ls]	944	968	5.2
LRR [sensitive, ls]	978	1001	3.1
LRR [sensitive, ls]	978	1001	71
LRR [sensitive, ls]	1201	1222	2.7
LRR [sensitive, ls]	1201	1222	61
LRR [sensitive, ls]	1264	1286	0.41
LRR [sensitive, ls]	1264	1286	9.2
LRR [sensitive, ls]	1376	1399	0.38
LRR [sensitive, ls]	1376	1399	8.5
LRR [sensitive, ls]	1421	1447	0.33
LRR [sensitive, ls]	1421	1447	7.3
LRR [sensitive, ls]	1463	1487	0.18
LRR [sensitive, ls]	1463	1487	4

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa1 [Oryza sativa]	176	1480	1e-120
I2 [L. esculentum]	191	1478	1e-105
Mla1 [Hordeum vulgare].	197	829	2e-33
Pib [Oryza sativa].	246	746	3e-30
L6 [L. usitatissimum]	248	512	3e-12
M [L. usitatissimum]	248	1076	7e-19
N [N. glutinosa]	271	611	7e-15
Pi-ta [Oryza sativa]	273	724	8e-23
RPM1 [A. thaliana]	275	705	1e-30
RPS2 [A. thaliana]	275	995	3e-31
Xa1 [Oryza sativa]	926	1430	7e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4645.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)