Report for 4649.m00175

 > 4649.m00175, length: 771, copies: 1 

MQQQMAMPAGAAAAAVPPAAGITTEQIQKKYAFYGMKTEDYEHLLPLAENIAKKFQGCPLVTKIASEHLRSNLCF

RYCSIFPKGYEFKKDEIVKMWMDSGLILIDSGTERPEDIGERYLVQLARKSFFTFATVGDPCSKFYAEYYVMHDL

VHELACSVSVGECLRLESSGYMQHKCTVRHLWIANFNKLTTEEIKAISSFENLRSLIIEDSYHVNDVWIAALEEV

VQLLRGLRLLSLKGITKLCLAKEVVNKHLRYISFSGMQDIDGISKLYHLQVLTAVKRISTAPKQVNNIENLSHLR

YVSYGSNGFGEFFVGRLTSLQELHNFEIQLKEGYRISSLRNLSSICKLQICNFENVGTHEEIIEAKLRDKSYLRS

LSLNWSETTNVLSHILILKIWKYQELRKCRSWAYLPALGNLQRLKHLELHKLAELKRIDQSSGNSLPPNLKTLVV

EGCKKLGELPLLPSSLTRLEVNDVGLTTLPRIYDHHVNNMDFESKETKLISVIISNCSNLISLEESFLLQEHHIR

SLRILRIVDCEKLIRAPLLFSEMDNLAEFHIGKCYRLRVRENDDNVLLPRTLKELSMVQCGDLQLPLLESLVGLT

NLTSLSLCNCGRVRSLPQSDVFRSLRSLREMAVADCTSLASLGGLGALSYLNWLEITECPRLQGYARYDEVDEDP

VLEFSLEVYSLWIHTPDMLQREPLRRLHYTKCLIISVGRDNIPWQWMQQNRTSLETLEILKPENLIWAVSPAKLT

ISEVQDVSPYCVQDPVRRQFY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	74	107	6.1e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	253	275	2.7
LRR [sensitive, ls]	253	275	29
LRR [sensitive, ls]	418	442	1.8
LRR [sensitive, ls]	418	442	20
LRR [sensitive, ls]	444	467	0.59
LRR [sensitive, ls]	444	467	6.5
LRR [sensitive, ls]	526	549	7.9
LRR [sensitive, ls]	526	549	87
LRR [sensitive, ls]	601	626	0.57
LRR [sensitive, ls]	601	626	6.3

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	29	756	1e-39
Xa1 [Oryza sativa]	63	703	6e-43
Xa1 [Oryza sativa]	228	665	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4649.m00175

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)