Report for 4669.m00226

 > 4669.m00226, length: 959, copies: 1 

MVGATASTLMGVMNPLLGKLSTLLEEEYGKLKGLHSGIASLRDELRSMEAALEDLSQLEEPSQQVKEWMHQLREL

SYDIEDCIDVFVQHLGQDDAHDGLISKIIGWIRTMKVCHHTAGQIGKLKEHAVEISDRRKRLKLDIVPSSSAYVP

IDPRLSAFFEEAGRIIGIDVPRDELIEWVTSDTNKRRVISIVGSGGIGKTTLANQVYQKVRSRFSWTVFVSVSRS

PNIIRILSDILSNIIKTNNTTSDDQKQLMQRIKEYLNRKSLEYHELVNMTREFLENKSYFVLIDDVWSKQAWKDI

QCAFPSNNNASRIMMTTRIQDVAKSCSFPHESHVYSMKHLGVDDSKRLFLKRIFGHENACPLELKEVTSDILKKC

GGLPLAIVNIASLLATKPATKQEWERVKNSIFCVLERDHEMEVVKRILFLSYYDLPDYLKVCLLDLSRYPEDFLI

KCEHMIWRWIAEGFISGKQGQNLEEVGERYFNELINRNMVQLVQMDYSGKAINCRIHDIMLDLLICLSTEENFVT

IVNSQTITSSTDKIRRLSLQGNCEENSVWLNTSDFSHVRSLSAFGDCKQIPMLSSLQILRVLDLEGCNHLNEDNV

RIEDIGSLHQLRYLCIHSFTKVPRQIGKLQLLQTLDLTNSKVTELPASIVQLRQLVSLELGFQARLPDGISNMRA

LQYLRCFNCSKNSINVVLELGNIIKLKRLVIHWDHDITGEDEERYKKPLVSSLCKLGQSNLQILNITRLYLYCTV

DFLIESWYPPPQHLRHFEMNGMAHFHRIPRRISSFSTLIYLDIRLEQLEEEDMQPLKDLPVLVNLYLEVRESNQE

TLIISHGGFQCLKDFSLLYAEDKKGGPGMIFEGGVMPKLQRLNIRYHAHITVPERGCGSDFSIHQLTSLKLFLVD

IYCAGATAREVEVAEVAIRNHANLHPNHPSLEVRKFLKEHMATNEDNDATEQLEGTSTS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	150	470	5.7e-56
NB-ARC [Pfam fs]	165	470	3.8e-56

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	3	705	7e-40
Mla1 [Hordeum vulgare].	11	954	1e-139
Pi-ta [Oryza sativa]	12	705	6e-82
RPM1 [A. thaliana]	17	891	5e-76
Pib [Oryza sativa].	48	349	3e-13
M [L. usitatissimum]	109	442	1e-14
Pib [Oryza sativa].	154	661	1e-67
L6 [L. usitatissimum]	161	442	1e-10
RPS2 [A. thaliana]	165	660	1e-19
Xa1 [Oryza sativa]	179	717	1e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	36	60

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4669.m00226

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)