Report for 4675.m00192

 > 4675.m00192, length: 1070, copies: 1 

MGMEAPKMKCYLPRFPINQSSCGRSGERYFVVIDDVWDVEAWEAVKLALFNNRCGSRIVMTTRNAAVASHCSRGG

VCVYQMEPLSFADSKMLFCQRAFRSQELYYPHLEEVCDEILAKCGGLPLAIITVSSLLAGKHAKDEWDRMLTAIG

HALAKNPDAANMTKILSLSYFDLPHHLRTCFLYLSVFPEDYKISKQHLINRWIAEGFVHEEQGWRTYEVGGNYFN

DLINRSLIEPVDINDGQAKACQVHDIILDFITCKAAEENFVTSVNSVEHGNISECRVHRLCVKNHNNEKVSKPTS

LNVTHVRSLTMFGHVDGISLFAFPILRVLDLSYSLLKDKHLKNIEKLHFLKYLSLRSTLITKLPRKIGQLNCLET

LDISYTEILELPLSIAKLECLANLYVGRGTRFPDRLIGKMHSLVELEEFGVSCELGKSLQGFSQLSKLRTLKVHL

FWWSDAEECQNYVSALLSSNLHHLYLTGGPLIMEKWYPPSPCIIRKLHIIGCYIRKVPNWMSSLGSLTELQLWIH

RMGPNDIEILGAIPSLCFLKLKTMCGINGRIIICSNKGFRSLTYFSLRIKRCGTLLEFEPESMPKLDNFQVEFRL

HGMDCLNGASDFGIQHLSALTKVKIGIWGNICSDGIYDPEQDMNNSITRSVVSLIKAAIEKLPNHPTSRFHLEYD

HGSCLLGETSQEFEGQGPDEAYPRQHKIFSLRELEDATNCFSDSNVLQRGRFDGSMYKGRLGDGSLVAVKKDYIS

RALSMGYPNIDWRTWHFQTQVEMPVHRNLMRLHGFCITPTKRFLVYPYMSNGTVASQRPPYEPPLDWRTRRRIAL

GSARGLSYLHDHCDPKIIHRDVKAANISLDEDFEALVGGFGLAKLMDHMDTDEPNAVRGTIGHIAPEYLSTGIIS

EKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKRLEMLVDPDLQSNYIDVEVESLIQVALLC

TQGSPTERPKMAEVVRMLEGDGLAERWEEWQKIEVVRQEEVTVVFLLPYPAVRPVTAVTARLQMMKSLVEITYFF

LLGRLCNLVSFAVSITKDDF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	3	213	8.8e-13
NB-ARC [Pfam fs]	24	213	2e-50
LRR [Pfam ls]	349	371	6
LRR [Pfam ls]	372	394	3.7
Ser/Thr pkinase [Pfam ls]	716	995	1.1e-15
Ser/Thr pkinase [Pfam fs]	776	918	1.8e-22

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	325	348	1.3
LRR [sensitive, ls]	325	348	35
LRR [sensitive, ls]	349	371	0.22
LRR [sensitive, ls]	349	371	6
LRR [sensitive, ls]	372	394	0.14
LRR [sensitive, ls]	372	394	3.7

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	26	567	3e-35
RPM1 [A. thaliana]	27	544	2e-51
RPS2 [A. thaliana]	27	400	1e-29
Mla1 [Hordeum vulgare].	27	590	1e-81
Pi-ta [Oryza sativa]	27	399	1e-53
Xa1 [Oryza sativa]	27	448	2e-23
Pib [Oryza sativa].	31	420	3e-53
FLS2 [A.thaliana]	689	993	4e-29
Rpg1 [Hordeum vulgare]	698	1000	7e-25
Pto [L. esculentum]	704	994	3e-36
Rpg1 [Hordeum vulgare]	704	1001	5e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4675.m00192

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)