Report for 4675.m00194

 > 4675.m00194, length: 631, copies: 1 

MAAHRWAVWAVLLLRLLVPAARVLANMEGDALHSLRTNLVDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDL

GNAALSGTLVPQLGQLKNLQYLELYSNNISGTIPSELGNLTNLDRRLNNNSLSGSIPKSLTAITALQVLDLSNNN

LSGEVPSTGSFSLFTPISFANNPSLCGPGTTKPCPGAPPFSPPPPYNPPTPVQSPGSSSSTGAIAGGVAAGAALL

FAIPAIGFAWYRRRKPQEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSL

VAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERPPSEPPLDWR

TRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY

LSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKRLEMLVDPDLQSNYIDVEVESL

IQVALLCTQGSPTERPKMAEVVRMLEGDGLAERWEEWQKIEVVRQEVELGPHRNSEWIVDSTDNLHAVELSGPRK

NHGIITLASSGKGSELSDDAVGLTGILYLDI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam fs]	93	116	8.3e-06
LRR [Pfam ls]	93	116	0.00013
LRR [Pfam ls]	140	162	0.029
Ser/Thr pkinase [Pfam fs]	276	475	1.4e-56
Ser/Thr pkinase [Pfam ls]	276	552	2.9e-54

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	69	92	1.6
LRR [sensitive, ls]	69	92	44
LRR [sensitive, ls]	93	116	4.8e-06
LRR [sensitive, ls]	93	116	0.00013
LRR [sensitive, ls]	140	162	0.0011
LRR [sensitive, ls]	140	162	0.029

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	28	156	9e-16
Xa21 [O. sativa]	31	172	1e-17
Xa21 [O. sativa]	65	172	6e-11
Cf-9 [L. pimpinellifolium]	67	238	3e-12
FLS2 [A.thaliana]	69	550	3e-55
Xa21 [O. sativa]	73	358	1e-24
FLS2 [A.thaliana]	74	171	1e-10
FLS2 [A.thaliana]	79	157	9e-11
Xa21 [O. sativa]	79	175	3e-12
Rpg1 [Hordeum vulgare]	258	558	1e-40
Pto [L. esculentum]	263	551	3e-48
Rpg1 [Hordeum vulgare]	264	557	1e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	214	236	in -> out

Report for 4675.m00194

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)