Report for 4734.m00158

 > 4734.m00158, length: 1290, copies: 1 

MAEVVLAGLRLAATPICVKLLCNASTCLGVDMTRELHELETIIIPQFELVIEAAEKGNHRAKLDRWLRELKQAFY

NAEDLLDEHEYNILKCKAKHKDSLVKDSTQVHDSSISNILKQPMRAVSSRMSNLRPENRKILCQLNELKTMLEKA

KEFRELIHLPAGNSLEGPSVPTIVVPVVTSLLPPRVFGRNMDRDRIIHLLTKPMATVSSSVGYSGLAIVAHGGAG

KSTLAQCVYNDKRVQEHFDVRIWVCISRKLDVHRHTREIIESATNGECPRVDNLDTLQCRLKDIMQKSEKFLLVL

DDVWFDESVNEREWDQLLDPLVSQQEGSRVLVTSRRDVLPAALHCKDVVHLENMEDAEFLALFKYHAFSGTEIRN

PQLHARLEEVAEKIAKRLGQSPLAARTVGSQLSRNKDIAIWKSALNIENLSEPMKALLWSYNKLDSRLQRCFLYC

SLFPKGHKYKIDEMVDLWVAEGLVDSRNQGDKRIEDIGRDYFNEMVSGSFFQPVSERYMGTWYIMHDLLHDLAES

LTKEDCFRLEDDGVKEIPATVRHLSICVDSMKFHKQKICKLRYLRTVICIDPLMDDGDDIFNQLLKNLKKLRVLH

LSFYNSSSLPECIGELKHLRYLSIISTLISELPRSLCTLFHLELLHLNDKVKNLPDRLCNLRKLRRLEAYDDRNR

MYKLYRAALPQIPYIGKLSLLQDIDGFCVQKQKGYELRQLRDMNKLGGNLRVVNLENVTGKDEASESKLHQKTHL

RGLHLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTE

IFRHCMTLTLENVPNMKTLPFLPEGLTSLSIEGCPLLVFTTNNDELEHHDYRESITRANNLETQLVLIWEANSDS

DIRSTLSSEHSSMKKLTELMDTDMSGNLQTIESALEIERDEALVKEDIIKVWLCCHEERMRFIYSRKAGLPLVLP

SGLCVLSLSSCSITDGALAICLGGLTSLRNLFLTEIMTLTTLPPEEVFQHLGNLRYLVIRSCWCLRSFGGLRSAT

SLSEIRLFSCPSLQLARGAEFMQMSLEKLCVYNCVLSADFFCGDWPHLNNIGLCGCRSSASLYVGDLTSLKSFSL

YHLPDLCVLEGLSYLQLHHVHLIDVPKLTTESISQFRVQRSLYISSSVMLNHMISAEGFKVPGFLSLESCKKPSV

SFEESANFTSVKCLRLCNCEMRSLPGNMKCLSSLTKLDIYDCPNITSLPDLPSSLQHICIWGCELLKKSCRAPDG

ESWPKIAHIRWKEFR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	169	479	1.4e-41
NB-ARC [Pfam fs]	222	479	3.3e-45
LRR [Pfam ls]	1233	1256	0.07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	618	641	1.2
LRR [sensitive, ls]	618	641	24
LRR [sensitive, ls]	749	772	2.2
LRR [sensitive, ls]	749	772	44
LRR [sensitive, ls]	805	828	3.2
LRR [sensitive, ls]	805	828	62
LRR [sensitive, ls]	977	1001	1.2
LRR [sensitive, ls]	977	1001	23
LRR [sensitive, ls]	1002	1027	7.5
LRR [sensitive, ls]	1002	1027	150
LRR [sensitive, ls]	1028	1050	2.1
LRR [sensitive, ls]	1028	1050	41
LRR [sensitive, ls]	1075	1099	3.2
LRR [sensitive, ls]	1075	1099	63
LRR [sensitive, ls]	1210	1232	2.1
LRR [sensitive, ls]	1210	1232	42
LRR [sensitive, ls]	1233	1256	0.0036
LRR [sensitive, ls]	1233	1256	0.07

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	31	700	6e-36
I2 [L. esculentum]	52	1284	1e-99
Pi-ta [Oryza sativa]	66	645	2e-21
Xa1 [Oryza sativa]	121	1140	6e-89
Pib [Oryza sativa].	185	650	2e-26
RPM1 [A. thaliana]	216	810	3e-37
RPS2 [A. thaliana]	216	670	3e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4734.m00158

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)