Report for 4748.m00116

 > 4748.m00116, length: 1084, copies: 1 

MAAFAGKEDEQRQRLASRKKASEAVPSAYRWNLVASVVDTMVGWDSEDTMVGWDSEVKALLGLPVLATMTLLGAI

HLIEGVAIGALIQLHTKGFLWAGNHLLLSNSSAGLRMDCQENNLKSFLQTNGHVVLQRVDNNYSLRYFTKNEVWH

ITNGYSIMLGKGAFGEVYKGILDDGCPVAVKRYIHGNLKEEFAKEVIVHSQINHKNVVRLLGCCTEENALMIVME

FICNGNLDNVLHCSNTKGCVPFPLYKRLDIAIEVAEALWCMHSMYSPVLHGDVKPANILLDENHSPKISDFGIAR

LLCANGAQHTKNIIGSIGYVDPAFCENGILTPKSDVYSFGVVLLEIITRKKAVDGTITLAQSFTDAIEKGKKVMN

LFDEEINDKQNMNFLEDIGKLAVKCLRRDVKVRPEMVEVATSLRMIRKDLEGEQGNLTQQHTSTPNNSTPSKNEG

SAGRQFGNLNIFKQEEIKHMTRNYSMTFREEFHERLYNGVLGMVHAVIVKQVSTSSKTDREVFLKTMGILCQKYH

KNVANVAGFHLGEYISECVYESCCELSQVNNGHISFSNRNLYEIICSTEKLPLHVRLSIAVQCLEGLVHIHSFLA

ENPESRGTSLFGNFRSANIFLDKNFMPKVFNANLSTFLGLCAVQQCTASVDCIHDQRSQKYYLDPKDVSDHLFNP

KSDVYSFGVVLLELITWKTAKYKSGGQAHMLTTDFLDTYRIDHSATDFFVKKVYDEEGKCFLHEAIAIGVECLKL

DVQMRPEMSDVLSRLRIISAAQSIRSKLMGPQAKGIMILIVNQIVTDKFSDCGDNGPSQYIAPTPVNNDVKIPSP

PTSASTISLDILKKITRNFSNNSLIGEGSHAKVFFGVLKDGKNSAVKKLNPNEETIVQVSTISKMLKHDNVVQIH

EYFIEGENHVLVYEYAPKGSLHDILHGREGVTGAQARPPLSWVQRVKIAITAAKGLEFLHEKAVPPVIHTNIKSS

NILLFGNDVAKIGDLGVSKQLHVEDYDYSYTRVVPQIFRYEAPELRGQYSVKSDVYAFGVVLLELLTGRKATPRL

SKDKVKQCVDPKLGRAFPLKAVARMVSFAHVTHG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	155	420	1.5e-42
Ser/Thr pkinase [Pfam fs]	159	414	4.3e-43
Ser/Thr pkinase [Pfam fs]	675	691	0.015
Ser/Thr pkinase [Pfam fs]	844	1048	1.3e-39
Ser/Thr pkinase [Pfam ls]	844	1081	1.1e-26

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	114	422	5e-33
Pto [L. esculentum]	136	418	2e-39
Rpg1 [Hordeum vulgare]	138	421	6e-27
Rpg1 [Hordeum vulgare]	143	765	4e-34
Pto [L. esculentum]	462	765	7e-13
Rpg1 [Hordeum vulgare]	483	1045	7e-26
Rpg1 [Hordeum vulgare]	739	1060	6e-13
Pto [L. esculentum]	818	1046	1e-28
FLS2 [A.thaliana]	837	1064	4e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4748.m00116

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)