Report for 4763.m00146

 > 4763.m00146, length: 847, copies: 1 

MVPERTESFGGLGRLRSPRIVPELMDGSEALVGSRDLERPRSPWLPSEPVNCSGGLGRPWMTPEPLGGSEGPGRL

WRPWLALKPRSVDSSGHSPRVDGSGRYLIVIDDMWRTSDWEHIWDAFPSNRCHSRIIITTRIRSVARSCCSHPWP

NGLVHEVKPLGATDSERLFSAVAHGWPRPANSGRVSNEILRVCDGTPLLIIAMAGLVSKQMQEEDYDDEEGDQSG

VTMDISRPCVAAYLPSGIRELKQVEDTLSPSYDNLPCELRLLSLYMSTFPQGYVIDKHLLIRKWKAEGLIAVHTL

QSGFEERAEECFSQLVQRCIIRPARTRRRACDCECNPCSYQVNHFMFQLLASKSADKNFVTTSCCDTGTLRGSSG

LQIRRVFLHHGQQQQQPADQEVPAQMEEMFSFTRSLTVSGEVDGISLEMFPHLVVLDLQGWEKLKDDDLPRIFSS

GKLFLLRYLSLRNTRISELPPEIGMLSSLETLDASHTRIAKLPPEVCTLRSLEELDLRSTRIQRLPERIDDLVAL

RHLRAGDGAASTRIPKGIDWGMLRDTLETLAAVDLRECSADVVRKLSLLRCLEVLSVSLSLRQCTDKEYQDNLSF

LVQRLKCLRSLTIRCELGCSMEFLDFSPEDAPQNLRHVAMHARFLTVPRWIAGLNHLSSLHIRVCKLAPEGVKIL

GRLHRLECLELGLDFLPREAIVIQGQGFMSSSQNRSNRAPLNSKIHEEEEDGDDEKNGIIIYPFRELLRLSVDCR

VPWLVFKEGAMPKLTDLELKLSTGPASHESPPSGIANLLSLEQVAVQYDAWYINSRSVRATVDAIRRQVAELRYT

VKLVNNGVEEDVEAVINPRRDS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	14	300	1.2e-08
NB-ARC [Pfam fs]	99	214	3.4e-11
NB-ARC [Pfam fs]	244	300	1.7e-09
LRR [Pfam ls]	455	477	0.61
LRR [Pfam ls]	478	500	0.45
LRR [Pfam ls]	501	523	0.22

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	455	477	0.056
LRR [sensitive, ls]	455	477	0.61
LRR [sensitive, ls]	478	500	0.041
LRR [sensitive, ls]	478	500	0.45
LRR [sensitive, ls]	501	523	0.02
LRR [sensitive, ls]	501	523	0.22

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	99	794	1e-22
I2 [L. esculentum]	101	528	2e-12
RPS2 [A. thaliana]	101	507	1e-11
Mla1 [Hordeum vulgare].	101	598	4e-34
Pi-ta [Oryza sativa]	101	492	2e-29
Pib [Oryza sativa].	103	802	9e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4763.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)