Report for 4763.m00158

 > 4763.m00158, length: 1017, copies: 1 

MSKGAMGRTSIMEKQEEALKEWEPLHESISKLLKGGRITDARERHSLAFMEMELGVIVAYLRMPLPPHTDCPGVD

LIDNQIQYHWSYYRDVVISLYNQYGEEAPNAGLLRKAMRCFRRRRSLEYNIPRTAYSLYRECSSDPRLELPSSEL

MPSPHQAAQVEAGALNDHLVGIDSMANEMLRWLMATDKGLRVMAIAGPAGIGKTTLAMELHRRLRCQTQEYYFQC

HVVAANFPRRPYRSKLVLQTILKQIMEQLDAPSPNSSEITMSMLEDNPELLTRNISEHLKDKRYFVLIDDILDES

DLEIIKGAFPNNNCGSRILFTAQHEWIAGWFLSNYNGVVHKMKPLNDSDSEKLLRTKAFSSMDDLLPDNLRLLCD

EILNKCRGIPLFITGMADWLKQQQHGSSAVLRVEQVRLLLKQFEYWLSFDYSYELSLSSLYLSMFPQGYVFDKDH

LVMKWENDGLIRILESSSEYGELYFSELVNTNIITPVGENYGPNLDEDELCQWQVNPFVLSFLASRAAEKGLVFT

SSTLTSLPSCGGNNTRIKRRLALHHPDPLLPEMLQQMDLSHTRSLLISGAVDRTTVPLDKFGYLVFLDLQGWENL

KDEDLLQICKMFMLSYLSVRNTRVSKLPPQIKELCNLKALDVSQTHIFKIPSEVCELEYLEILELRGTQIKHMPD

KIVEKRKYEQLYGNGSVFGMIDSNQKVLTKISKKIHQLRYLKTLATIDLSEFSAKSIQSLGDLERLEVLAITWSF

HQCSDEDYQEALRLSIERWRKLKSLTIHCGLGCSMEFLGSLTKPPEGLKKFKVIAGKFVSVPRWIERLVYLTFLQ

ITVCKQVADDVKILAGLVKLQHLVLCLEFIPEEAIVIETKGFKEIERFSLDCPVPWLTFEKEAMPKLTYLRLNLY

AFPASEMSVPSGISNLEKLSEAKICYNARYINSPNVKRTVEVVSKEVAKHHNSIDLFINGTQIEVNQAGEEKAES

ATRFNQVNPPEDVVQAEDEAALRRETEFQSEKEDEDEAECHA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	153	207	2.5e-08
NB-ARC [Pfam ls]	153	466	1.8e-13
NB-ARC [Pfam fs]	275	386	5.3e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	613	635	2.3
LRR [sensitive, ls]	613	635	25
LRR [sensitive, ls]	636	658	0.52
LRR [sensitive, ls]	636	658	5.7
LRR [sensitive, ls]	659	682	1.1
LRR [sensitive, ls]	659	682	12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	160	747	2e-38
RPM1 [A. thaliana]	169	824	2e-25
RPS2 [A. thaliana]	169	834	4e-16
Mla1 [Hordeum vulgare].	169	891	7e-43
Pib [Oryza sativa].	169	924	7e-35
Xa1 [Oryza sativa]	178	829	1e-12
I2 [L. esculentum]	185	919	5e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4763.m00158

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)