Report for 4767.m00146

 > 4767.m00146, length: 1502, copies: 1 

MAEGAAGAVTTLLGLIRDEAQLLGRVKKDVQFIKEEMESMRSFLAHLTETEPPGGEHDKQVRELAQDCSNCIDTY

LQRGDPAVRHASWGRGAGILQRYIRWAPWMVEKLLAQHYAAIRLRELKDRAHDVGQRRLRYDVEVPGKPSSKAAG

GAASWSVQSEEASPSTTIGAQAPDEEDEDEEEEEQQQQDQEHDAATSTSASIITVSADQRRRRALEPRSLENFCS

DELTRWVKSVGTMGRSSSSSPSLPPIAIVPPPPTPRPAQGGSTEVVVAAGANARDALASVATTHFDRSVWINLPA

MHLHRSWHQISTKAILCYILRECESLNKQGKDHGQVNPKMEEIEGNITKNSAAEEQEEKIKGEAAYGNKTEDEIP

QTPDGSISKTEPVGILFRALQPNAVSNVAIMGTNQPLDEQNIFPEMANKLKKHIESGQTEFSIHLDQAKYESILR

EVFPLATSKPQKVQEGTTALSSDSSSHVAAATAAAAAATTAATLEKVQIEQIIHKTKQDILQCILQELQQQQLPE

ADKSLKEEGLTKPKPAVQDDHASAANEAKENKPLAAKDEAKENKAPVAKDEAKENKAPPPTTISTATTMLGKDQI

EEIIQKVKQQVLQGLHHRPPPHPPRADRSFKGEPGIHKPGGDEYANAIKNTKQKIKQLTGKIMEQMTIQIICDKI

KTLLGGKKTMIIIEDDKDYASQWREITNALHQLSSSGSAMVVTTPNIQKAKEICCPQQEPITNSIAGLYYDTLLK

LTSKRVNKDANQIFRDILDKCYPSEFCMKIFAHALYANPNRSKQDLRKLLDSLDSKKSLGINAKKMIKFSYTDLR

KEYKSCFLYLAIFPPGYPVRWSTIVGRWVVEGLITKEDWPSAVHHAERCFDTLIDMWLVYPSDIGGAGKLKRLLA

GCIDSNSSSNAKNNISFRNEAPSSSSVQIPYKIKKMSSMEVLSNVKASWISRELKDIGKLWQLRKLGVVIDDKDS

ILKNLLPAISDLCECLRSLSITIFPSTKGEGTPSNGDLPEYTSHCLKYRPKLLENLCLQGTTQKGQLLTLFVERF

TNLAKKNLEGLGDLPNLCYVRLRHKGYTDGKLTFNEHKFKNLKGETIEKYMLTFKKDEFQHLKYLLAEGFSKSFE

TNITFEDGATPKLEKIILYSFANIMSHPGVSSLPKFKELELKGHKPLLSSFENANKISKVTLHSNLMKHADLQIF

AKRPSVCCLILLGNSYDDSLFTFNKGEFPKVDLLIVECPTITEISFTEGAAPMLEKIIWSFTKMNSLSGINNLSK

LKELEFIGDLVPDQVRIDINTHRKHPVLNHKPPQHQDQENGSEQGEEERNQHYLKDICNNILLLKYLSLRRTDVT

QLPSEINNLYELEVLDIWQTKVPEYTTKHILLLKLKRLLAGCIDSNSSSNAKNNISFRNEAPSSSSVQIPLKIKK

MSIMELRKLGVVIDDKDSILKNLRTAISDLCECLRSLSITIFSQYKRRGHSIQWRLTRVYFSEQSRLVKVSIIPK

SG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	583	864	1.8e-06
NB-ARC [Pfam fs]	817	864	1.8e-10

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	636	973	2e-12
Mla1 [Hordeum vulgare].	674	968	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	642	662

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4767.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)