Report for 4767.m00147

 > 4767.m00147, length: 1444, copies: 1 

MAEVAVAAVTSLLGQIRNEALFLGRVKSDVRFIKHEMESMRSFLEHLAETGGDHDPQVQTWMEQVWELARDCRSC

VDIYLQRGNPAAVLGPRGGALRRYLCWAPWFVQSMVHQHYAGIELSELKERACDVAQRRKRYDVVVAPKLEAVPP

PASSSEAEEDYGATRDNLAGGGSSNSDLGRTSALEGRSLENYCGEELAHWVMGTTTTMGSSSASIPSIAIVSPPI

QEADDTAEMVAIHDALASVAATHFERSLLVYLPAMHHNPSRIRIKLSDILCYILYQCHMEKESWHSRWGREYLSM

VEEYRASNPVNAMKCYIYKMKKIADICRGYTFKRVFQNVVQIGRMVTQRLNGELERGVDAMLGLTNKKPLCILLK

ALDYLEYGADFTDVRKYHELRVDRMPFQFQMLQLDEEKLLVATAQKLKGHIETNIPIHLSHATYESILREVFQAS

NKNLQAQEGTTAPSPGVGTSHDVAAAAATPTTTTFDKDQIKQIIYIHMVQQEVLQELQDKQPSQVPEAGKSLVKA

EQATPNPANQDDHEFTSAIQETKEKIAQIGVKIEERLLIECIVEEIKELLGGKRTLIIIEDDKNYVSQWYELRNS

LEQLSCSGSAMIVTTQDTQRAKEICYPPREPITNSIVGMYHDILLKVTSQRVNGDASQIFRDILNKCCPSEFCMK

TFAHALYTNPNRSNEDMCKLLGSLHSQQSSGINAEKMIKFSYDDLRKEYKSCLLYLSIFPHGYSIRRSTLVERWV

VEGLITKEDWPSAIHHAERCFDTLIDRWLIYPNDIGAAGKIKSCTVGNLVHEFITKIAKKQHIVEPRLSHHLARH

FSIFNELQLRGSDRIDRFFKNLSKSSQLSMLKVLDLEGCCCFKGKEHYLKDICSNILLLKYLNLRGTDITKLPHQ

INNLYDLEVLDIRQTKVPAFATKHVLLLKLKRLLAGSSISETTMSIRDKEPLSSYVRIPLGIKKMANVEVLFNVK

VWTGQELKDIGKLWQLRKLGVVIDDKDNLLKNLLTAISDLCECLRSLSITIVPCSTKREGTPSIGDLPEYISRCL

KYRPKLLESLCLQGTTQKGELLTLLAERFTKLVKVTLSWTSLKQKNLEGLGDLPNLCYVRFRNKGYTDGKLTFIQ

QKFKNLKYFLVEGKNMRGIKFQKGAAPRLEKIVLSFTNIESLDGVGDLPRLEELELKRNRFLLSLSEVGETLEKY

MLTFKKDEFQHLKYLLAEGFSKIFETNITFEDGATPKLEKIILNSFANIMSHPGVSSLPKFKELELKCNKPLLSS

FENANKISKVTLHSTLLKNADLQILAKIPSICCLVLLSDSYDESQLTFNKGEFLMLNLLIVKCPTITDISFTEGA

APMLEKIIWSFTKLNSLSGIDNLSKLKELEFIGDLVPDQVRIDINVHRKHPVLNHKPPEHQDQENGSEQGEKEDD

PRFPACSWLFLKNKYWSDN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	476	760	1.3e-06
NB-ARC [Pfam fs]	713	760	3.3e-13
LRR [Pfam ls]	883	905	4.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	883	905	0.4
LRR [sensitive, ls]	883	905	4.4
LRR [sensitive, ls]	1081	1104	7.3
LRR [sensitive, ls]	1081	1104	80
LRR [sensitive, ls]	1153	1174	0.53
LRR [sensitive, ls]	1153	1174	5.8
LRR [sensitive, ls]	1175	1198	3.3
LRR [sensitive, ls]	1175	1198	36

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	543	1002	5e-13
Pi-ta [Oryza sativa]	564	934	6e-17
RPM1 [A. thaliana]	567	1181	1e-17
Mla1 [Hordeum vulgare].	567	1160	2e-24
Pib [Oryza sativa].	570	1181	1e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4767.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)