Report for 4776.m00115

 > 4776.m00115, length: 668, copies: 2 

MWKMVDALLRCSALVALVLHFVVNGCSAVNTEGSALLKFQSRVEEDPHGAMAGWSERDGDPCSWNGVRCVDGRVV

ILDSDWKCSLPIRSRIIVAKCSRNLKDLSLRGTLGPELGSLSHLRALVLSNNLFDGPIPKEMSDLAMLEILDLSN

NNLTGEVPQEIAEMQSIKHLLLSNNNFQWPLIQNSYRNFDQEIDFDVYDERGDVYQRSENGFESDSSSEENTKDN

NNLSAHLSSQFAARNPTVQLSRRRLLEDTNLAAASANAPVPAVASVPSTGTGSFSAFKEIKVPPPLSPPSSPPMS

SGPPQRSKRWLYAIVISSIALLFIGIACMFLLCRNKSVATIGPWKTGLSGQLQKAFVTGVPKLQRSELEGACEDF

SNIVASYPHYTVYKGTLSSGVEIAVVSTVIATNKDWSKHSEGRFRKKIDLLSRINHKNFINLLGYCEEENPFMRM

MVLEYAPNGTLYEHLHVEGFDHIDWNGRMRVIMGVAYCIQHMHELNPSITHPDLHSSAILLSEDGAAKVADMSVW

QEVISKGKMPKNDDIVDHHEPVSADPAGNVCSFGLLMLEIISGRPPYSEHKGSLANLAMECIKDDRNISCLLDPT

LKTHKENELEIICELIQECIQSDPKKRPGMREVTTRLREVLAISPEAATPRLSPLWWAELEILSVEAT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	142	165	0.14
Ser/Thr pkinase [Pfam fs]	386	521	1.2e-09
Ser/Thr pkinase [Pfam ls]	386	633	1.5e-10
Ser/Thr pkinase [Pfam fs]	557	633	0.12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	118	141	1.1
LRR [sensitive, ls]	118	141	21
LRR [sensitive, ls]	142	165	0.007
LRR [sensitive, ls]	142	165	0.14
LRR [sensitive, ls]	166	190	1.4
LRR [sensitive, ls]	166	190	27

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	35	175	1e-11
FLS2 [A.thaliana]	84	640	5e-29
Xa21 [O. sativa]	84	474	3e-11
Pto [L. esculentum]	367	643	9e-18
Rpg1 [Hordeum vulgare]	368	640	8e-11
Rpg1 [Hordeum vulgare]	377	640	2e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	310	332	out -> in

Report for 4776.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)