Report for 4797.m00189

 > 4797.m00189, length: 957, copies: 2 

MAAVIPKLSKLLMEEYGLQNSVKEGITFLNSELESMQAEVDKISKVPLDQLDSQIKIWARDVRELSYDIEDNVDT

FMLCVDDLEARKKHDFTWLIDKYCKSLSELKIHHKIANDIKHDIIPVKEVVERHDRYNADDVDSKLPTIIDPRIL

KLYDNVTKPVGVDKASGDLIKKLSMETDQSSQKLKMISVVGFGGLGKTTLAKEVFGMLRVQFSYACFVSVGRKPD

IKKVLKSILIEVNKQKHMSDLAKLSERHLIDEIREYLENRRYLVVLDDIWEISTWDIIKCAIVDSNCGSRVIATT

RISQVAEEVGDIYNMEPLSDDNSKRLFNRRIFGADCIGTTNNQSIEAMEKVLKKCGGVPLSIITIASLLVDKPLE

DWSNVFDSIGFRLEDNDGFQNTRKILSFSFYDMPSYLKNCLLHLRIFPEDCLIEKESLIWKWIAEGFVHVEQGKG

LFEVGERYFTELINKSMIQPMDFNNYEGTLDGCRIHDMVLDLIRIISTEENSTTVLDRMHEEHNTSLVSRNVRRL

ALHISWNQDIDNNLPVDMARLRSFNAFECPTSMMPPLLDFHALRVLALEDCDITGGYFLKHLGNLRQLRYLGMRN

TGKVELPQEIGNLRHLQTLDVRDSFLDALPVTVYELSKLLCLCMDSFTEVPAGLGNLKSLQELRVYVSDDSCPNF

AAELLKLTDLKILHINWYWEVDEVSLKDLVESLRSLRGIEDLDFFSCSDAEMSGWEGWEPPRQLRRFSIDSVRVT

LPRLPSWVNSTCVPHLSHLDLRVKAMEMQDLEALARISELRFLSVNVEAGFSWTVPGGGLFPNLRRCHTDIALTF

LHGAMPMLMEIELCVVASGGGATSYDVGLGNLLLLKTVEVWIACEGATASQWLIKEDKEDGDDEDISATDQELCD

EGGKEDTAFRLIGENKHTLAPARGGAPARQQGGGAPFSGEPFSGPASRMGAPSQLAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	145	448	1.2e-48
NB-ARC [Pfam fs]	160	448	7.1e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	667	1e-71
RPM1 [A. thaliana]	3	794	1e-58
Mla1 [Hordeum vulgare].	4	876	1e-134
RPS2 [A. thaliana]	12	630	5e-22
Pib [Oryza sativa].	55	306	7e-11
N [N. glutinosa]	131	550	2e-13
L6 [L. usitatissimum]	160	384	1e-10
M [L. usitatissimum]	160	422	1e-12
Xa1 [Oryza sativa]	165	681	3e-35
I2 [L. esculentum]	168	795	2e-43
Pib [Oryza sativa].	178	639	2e-59

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4797.m00189

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)