Report for 4809.m00059

 > 4809.m00059, length: 669, copies: 1 

MTSSEKYSMHFIGFAHYKVQTNNKYSALNNAPSSRIFRHKYNHIFCVTDMGDWYDKLSQSFRDTAKEVLAKTDID

PNVRCFPKRQMKRITNNYSTTLGRGGFSVVYKGRLDDGRSVAVKQYNWRTQKEFTKEVIIQSQCSHKNIVRLLGC

CVEAAAPILVTEFVPNGNLSDLLHGNSGLLPVTLETRLQIALDVAEALVYMHCSQSYPILHGDVKPSNILLGDKG

VAKLCDFGISRLLSMDSDEYTGFVIGSKGYVDPVFCQTGRLSQKCDVYSFWVVLLELFTRKKGIDDMKVCLAEIF

ACSSRKGDEHKLFDMDIVTNENMEFLQGIGRVALECIKFEVEERPEMRLVLEQLLSLKRSRDKSIHEMLVVRKEI

EVFLRGCGFGRFILSKESVDDLICNLKIVLKECASGKAYIGKSRGTPLMAIKMSTAVTEKWKDMLGNEIAVQSRI

KHMNVAKLIGYCLDHSDGTVLIYEYGAISLYDVLFGDAGKIYRPFTCDLRLKIAIGAAEGIAHLHSLGVVHGDVS

INDILLDHVSSSLVKIAGYGTSGLPDIDKALDSLETGHGKKEHDVYSFGLVLLTLFTWKKVSLPHDLKSEPDKPV

LLHQEAIRGRRCNHLEMIKGLASRCLTSEATKRPSMVEVAKHLNFILIFPERRKTCHDLAIYQSRMLSD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	91	356	6.3e-41
Ser/Thr pkinase [Pfam fs]	96	285	2.2e-43
Ser/Thr pkinase [Pfam ls]	403	645	2.2e-12
Ser/Thr pkinase [Pfam fs]	409	542	9.7e-13
Ser/Thr pkinase [Pfam fs]	569	645	0.017

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	21	377	2e-26
Pto [L. esculentum]	50	354	7e-37
FLS2 [A.thaliana]	56	358	2e-34
Rpg1 [Hordeum vulgare]	86	646	1e-23
Pto [L. esculentum]	402	651	2e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4809.m00059

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)