Report for 4812.m00152

 > 4812.m00152, length: 677, copies: 1 

MGDWYDKLSQSFRDTAKEVLAKADIDPNVRCFTRRQMKRITNNYSTTLGRGGFSVVYKGMLDDGHSVAVKQYNWR

TQKKEFTKEVIIQSQCSHRNIVRLLGCCVEADAPMLVTEFVPNGNLSELLHGNIGQLPVSLETRFQIALDVAEAV

VYMHYSQNHPILHGDIKPSNILLGDKYVAKLCDFGISRLLCMDNDEYTGFVIGSMGYMDPVYRETGRLSPKCDVY

SFGVVLLELITRSKGIDDQNRSLARVFAHSSIDERYKLFDNEIVTNENVDFIQEMANLALDCLKSEIEDRPQMKE

VLEHLYSLKRKMLEQERKIAELMEERRIAELTERRTVAFREIKAILQDIGFERLVTKEKIDSIVGNPKQVSTSEA

FSGKSSVLIQRAIGKICMGHLKNIRFIVIKMSVEADEIWKEMFLYEMIKQSRIEHCNVAKLFGCCLDHVDAPVLV

YKYGDIGLHDALFGNAWQQFDCPFACEIRLEIAVGAAEGLAHLHSLNVVHGDVRTANVVLDVYSKSKLEMPGITA

FMAKIAGYGTQRLLSLDKAKHEIFLTENIHYKDPHFLKTGLMAKEYDVYGFGVVLVELFAQNMVQMHDVNMVLKE

LDGIPARCHHLKEIKKLASWCLASKVTERPAMDKVVRCLRAVLTNLQNLHDPCNCKSMYNKSAMQSEQITSAKSA

SS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	42	307	3.3e-46
Ser/Thr pkinase [Pfam fs]	47	307	6.9e-46
Ser/Thr pkinase [Pfam fs]	389	511	2.4e-06

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	1	309	1e-35
FLS2 [A.thaliana]	7	311	7e-37
Rpg1 [Hordeum vulgare]	13	372	1e-27
Rpg1 [Hordeum vulgare]	32	636	6e-27
Pto [L. esculentum]	387	639	2e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	305	331

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4812.m00152

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)