Report for 4841.m00158

> 4841.m00158, length: 378, copies: 1
MESSPPPPPPTITVQVKFGGRTIPVEVPAAATAADLKRLLQPLTNVLPRGQRLICKGKVLADAASLSSMQVVNGS
KVMLMASQGLHQGDGPITKNSSVPAPSTRRASNVKEAQIQKSDTNVSKIRPERWKATGIIALSDSSLKAVPEEVW
GCGSSIRVLDVSNNCIEAIPQEIAALRSLQKLILTANDIADGNISWEGLTCVQTLTVLSLSQNRLVTLPSSLGSI
THLRELRIANNRLENLPVEIGLLKHLEILIANNNRITSLPSSIGGCESLNEVDLSSNLLAELPEAFGNLQHLKAL
SVRNNGLTSLPSAFFIKCSQLITLDLHGTEITNDVLRQVDGWEEFDERRRKKHQKQLDFRVGSSVVFDEGADDDY
RRL

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]1551770.028
LRR [Pfam ls]2042260.071
LRR [Pfam ls]2272490.073
LRR [Pfam ls]2502720.26
LRR [Pfam ls]2732950.026
LRR [Pfam ls]2963190.18

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]1551770.0012
LRR [sensitive, ls]1551770.028
LRR [sensitive, ls]1782000.96
LRR [sensitive, ls]17820022
LRR [sensitive, ls]2042260.003
LRR [sensitive, ls]2042260.071
LRR [sensitive, ls]2272490.0031
LRR [sensitive, ls]2272490.073
LRR [sensitive, ls]2502720.011
LRR [sensitive, ls]2502720.26
LRR [sensitive, ls]2732950.0011
LRR [sensitive, ls]2732950.026
LRR [sensitive, ls]2963190.0077
LRR [sensitive, ls]2963190.18
LRR [sensitive, ls]3203431.1
LRR [sensitive, ls]32034325

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
FLS2 [A.thaliana]1353352e-12
FLS2 [A.thaliana]1353468e-12
FLS2 [A.thaliana]1353371e-11
Xa21 [O. sativa]1353051e-11
FLS2 [A.thaliana]1443461e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value
Ubiquitin family12841.2e-11

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation