Report for 4845.m00233

 > 4845.m00233, length: 517, copies: 1 

MATRVKPPPPSRPVVAKSPPRRQPHPPPPPPPPLPRHALHRQHEREGEATMSVWSVGFINARLSQRTPVLGLRLW

VLVAAGAAAAVVLALLIVVCLCRRCRRRRCSRLAPAPPHHGRSNRSLKQQQSMVSDKDIEEAARWPPPPSFQPPI

EVIKAEQTAPLIMVEAARTSGETATSSGGSTRGWSTESGGSDAAEPEASRRGWGRRYTRRELEEATNRFAAENVL

GEGGYGVVYKGILRDNTAVAIKNLHNNRGQAEKDFKVEVATIGRVRHKNLVSLLGYCEGACRLLVYEYMENSNLD

KWLHHGDDEISPLTWDMRMHILLGTARGLAYLHEGLEPKIVHRDVKSSNILLDRHWNARVSDFGLAKLLCSERSY

VTTRVMGTFGYVAPEYARTGMLNERSDVYSFGVLIMEIISGRTPVDYTRPAPEVNLVEWLKRMVAERRVEEVVDP

RLPETPPPKVLKRAVLAALRCVDPDGGQRPTMGHVVHMLEDDLKFRDELQLARDLSPHASDSYEYEL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	219	419	1.8e-43
Ser/Thr pkinase [Pfam ls]	219	489	3e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	197	499	4e-59
FLS2 [A.thaliana]	205	490	1e-34
Rpg1 [Hordeum vulgare]	205	491	1e-39
Rpg1 [Hordeum vulgare]	212	490	1e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	75	97	out -> in

Report for 4845.m00233

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)