Report for 4863.m00131

 > 4863.m00131, length: 1642, copies: 1 

MGRRSIMQVLARFFWASDRFHAELSRCKHVSKLSSLLQMQECISRIVKKHTPSFYDVGQFKNILGWSYLVTVLAQ

SCREWPPRNETLVHAHRGCCDCESAIRRAAFSRDPPVVWWWGFRAGENLRQMDWFKGLVFYFNSCDYWLDHGLGG

PNRLFIVPSAPVLARSCDTYTGLVRSLLALAFTKLAQSRASGRARARRVHWGTMGLVSTAAEAAIGWVVQSILGS

FFTGQMQVWTREVGLDKQVEELETEMRNMQMVLAEAEGTKIDNRPLSESLDEIKELIYDAEDFPYPGKGSSAAAC

TNPEESSASSSTPSYIQQISNRMNQNISWVMDGKKRKREEEEEPTHSVMLPPEVKHGISERINGIVNHLRIRGNP

VQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHKVYGRDAERDNIIELLTKGKSSDLDVVPLVGVGGVGKTT

LARFVYNNNRIENHFDLRMWVCVSDNFNEKSLTCEMLDHVCKDRQEYGNISNFDALQKILLEKIRHKRFLLVLDD

MWEDRDRKGWENLLAPLKCNEATGCMILVTTRRTSVARMTGTMSKIDVNGLDETEFWSLFKAWAFLGNENQERDP

TLRSIGQHIAEALKGNPLAARSVGALLNWNVSFEHWRKIQYKWRSILEQDDDILAILKLSYEFLPVHLQYCFSYC

SLFPKDHKFCGKKLVRAWISQNFVKCECHTKRLEEIGKQYLDKLVDWGFLEEVESHYVMHDLMHDLAEKVSSNEY

ATVDGLESKKISPGVRHLSIITTSYDKEEHCNFPSEKFEKIIQNIRSLQKLRTLMFFGQNNTMLLRFLHTLCKES

KRSTYGYLDIVNTSIPQALTKFYHLQVLDGDSTGNLVVPIGMNDLINLRHLIDHEEVHSAIASVGSLTSLQELTF

NVQAAGNFSIGQLSSMNELVTLRICQLENVKSEEEAKSARFIDKEHLEALSFTWNDLSMTSEPTAEKTTDDVLEG

LEPHHNLKHLQLTRYSGATSPTWLASTVTSLQGLHLYNCREWRVVRSLEKLPLLQKLKLVRMWNLMEVSIPSYLE

ELVLVDMPKLKKCVGTYGQDLTSGLRELMVKDCPQLKEFTLFHSNLFHSQQKSWFPSLNKLTISHCQHIIAWKIL

PLEEMGALKELELIDVPVVEELSVPSLEKLVLIQMPSLQSCNGITASPPLQFSNSQVDQTEWVSSLCELKIHDCS

NLVLPWPIPLVSYLSIKEVSAFPTLVIKQRKFTIKYSELSEMDGRIFPFHNLKSITSMRLENCPNLIYNWSEAFS

QLIALKHLDISKCPSLLQRHVMSEFLHENTTPDTNYLVPSLKSLKIFSSGISGLSFLKRLWLSSSQDLKSLQLHS

CTALEDLNIWGRQQLGVLEGLQGLSLLRRLNIEMNPELFAAWALKLQEQEQSGNQVGLFPPSLIELEISNLEGSI

HPCFFSCLHSLTRLELGDSPELVTLQLGYCTALESLTIYDCKSLASIEGLQSIRNLRRLTTRDSPGVTPCLQLVS

QQEGASGIWSRLEVLCTDGASVLTTSLCKHLTSLQSLVFWSRFNDDEPMVSLTEEQERALQLLTSLQQLEFSNHH

YLESLPANLRSLDSLEALHINGCRSIRRLPEMGLPPLLTCLNLIGCSKELCLQGKMAQTEKLMVYTA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	397	704	3.4e-64
NB-ARC [Pfam fs]	399	704	1.4e-63

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	1279	1305	6.5
LRR [sensitive, ls]	1279	1305	140
LRR [sensitive, ls]	1331	1355	1.8
LRR [sensitive, ls]	1331	1355	38
LRR [sensitive, ls]	1435	1456	4.8
LRR [sensitive, ls]	1435	1456	100
LRR [sensitive, ls]	1457	1479	1.9
LRR [sensitive, ls]	1457	1479	39
LRR [sensitive, ls]	1565	1588	1.7
LRR [sensitive, ls]	1565	1588	36
LRR [sensitive, ls]	1589	1610	0.56
LRR [sensitive, ls]	1589	1610	12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	223	961	3e-26
I2 [L. esculentum]	242	1497	2e-90
M [L. usitatissimum]	333	1364	1e-14
Xa1 [Oryza sativa]	333	1600	0
Pib [Oryza sativa].	383	834	1e-26
N [N. glutinosa]	405	745	6e-11
RPM1 [A. thaliana]	409	1093	3e-35
Pi-ta [Oryza sativa]	412	924	7e-21
RPS2 [A. thaliana]	413	1165	2e-24
L6 [L. usitatissimum]	421	1536	3e-12
Xa1 [Oryza sativa]	973	1639	1e-50

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	238	265

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4863.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)