Report for 4863.m00134

> 4863.m00134, length: 1441, copies: 1
MGLVATAIEAAIGWVVESILGNFFTGQMQVWTREVGLSEEVEELETEMRSMQMVLAAAESSKIDNRPLSESLDEL
KELLYDAEDVMDELDYYRLQQHIEGGKGSTAASCTNPEGSYVSSSTPSYFQRKRKREEEEEQTHSTMLPLEIKHD
ISKRINEIVNCLRTRCKPVQGVLQLEILRQIAMPKHSQSEPRKPRQTTSLAIEHKVYGRDTERDNIIELLTKVKS
CDLGVLPLVGVGGVGKTTLARFVYHDQRIKDHFDLRMWVCVSDNFNEKNLTHEMLELVCKDRQGYKNIISFDVLQ
NTLWEEIRGKRFLLILDDMWEDGNRSGWDKLLAPLKCNEEWAFLGNEKLECNPTLQSIGKHIAKALKGNPLAARS
VGALLNRSVSFDHWRKVQHKWKFLLKQDDDILAILKFSYEFLPVHLQHCFSYCSLFPKDHKFNGKKLVRAWISQN
FVKCECRAERLEETGKQYLDNLVDWGFFEEVESHYVMHDLMHDLAEEVSSDECDTVDGLESKKISPGLQHLSIIT
TAYDREEPCNFPREKFENILQSIGSLPKLRTLMFFGENSIMLLRSLNTICKESKRLRLLKIYVTAADISSTHNLF
KPNHLRYLEFIVVPTNNMFGSRGIVNTSIPQALTKFYHLQVLDVSSKGNLAVPTGLNNLINLRHLIAHEKVHSTI
AGLGNLTSLQELIFKVQDADNFNIGQLRALNELVILGISQLENVKTKQEASSARMIDKEHLEELSLLWNDNSMNP
EPTAEKTRDDVIEGLEPLQNLKHLQLIRYSGATSPTWLASRVTSLQVLHLENCRQWQIVQSLEMLPLLRKLKLIR
MWNLMEVSIPSCLEELDLVNVPKLEKCVGTYGLDLTSGLRVLIVKDCPILNEFTFFHKDYFHAEQKSWFPSLNKL
IVGRCHRIITIAEVSYTYFVKLCYRAWKILPLEEMQALKKLELMDVPVVEELSVPSLEKLVLIQIPRLQSCRGIT
TAPSPHFSTSQGDQRELVCGLRELTINDCPSLLVQFPIPPSSLISFLSIKGLSSFPTMVINRRVLTIESNELSEL
DGRISPFHNLKGITWVNLRRCPNLTRISIDGFSQPHVMSKPVHDNSIPITSYPVLPSVNSLSIQSCGIAGGWLTL
MLPHLQSLENLELRDCPQIKLLSTSQCTKIEAPNSLASAETTSARDKYLLQIPYNLLRSLKWLIIWACRDLEFSG
VNEGFGGFTSLVELQIRDCPRLVPSLEQEQGSNQVGLFPLSLVHLGITNLEGSVHSRFLCLPSITKLDLWNSPDL
KSLQLGYCTALVDLAIDSCKSLASIEGFQSIRNLRSLRVGDSPSVYPCLQLMSQQQGASDIFSQLETLTVDDASV
LSVPLCKHLTSLRVLGLHRDGYSGKSMASRANFLTGQMQVWTREVGLSEEVELETEMRSMYDAEDVMDELDYYRL
QQHIEGGAESHQPSIP

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
NB-ARC [Pfam fs]1903361.5e-29
NB-ARC [Pfam ls]1904573e-44
NB-ARC [Pfam fs]3424571.1e-23

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]103610613.5
LRR [sensitive, ls]1036106173
LRR [sensitive, ls]106210861.1
LRR [sensitive, ls]1062108623
LRR [sensitive, ls]113211534.1
LRR [sensitive, ls]1132115386
LRR [sensitive, ls]127412980.96
LRR [sensitive, ls]1274129820
LRR [sensitive, ls]133913602.8
LRR [sensitive, ls]1339136057

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
Xa1 [Oryza sativa]81018e-17
Mla1 [Hordeum vulgare].207446e-26
RPM1 [A. thaliana]366883e-26
I2 [L. esculentum]4112511e-81
RPS2 [A. thaliana]539001e-18
Pi-ta [Oryza sativa]747137e-18
Xa1 [Oryza sativa]9413651e-151
Pib [Oryza sativa].1766703e-22
Xa1 [Oryza sativa]81513788e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd
putative coiled-coil3562
putative coiled-coil6890

TM-HMM search for transmembrane domains

DomainBeginEndOrientation