Report for 4885.m00177

 > 4885.m00177, length: 748, copies: 1 

MGSCTTLCFKDPVDMMQANGTCDGIGCCTIETMREVQGFRLRIVRQDGIGQVVPQEQSSVKACLTQTVTAHPRTK

QPMLAVETLNASMRTGVAITAIAPMVIPMGFLTLKKAVLRFSQSNKKYLEVPVPHGPRGYNPFPKGICNRFCGNT

NVPFPFGLEEGCYALEKFRLNCRAGKLFLDRGDVDYLVRNISVDNGYMSVTNEQNNSTSNGTEIMVVARTMHGSS

EDDPQLDLFDLTQENDMKMWWAVVSFTCQEATQDINNNSYACRSVHSECIDVNVTHGTQLGYRYVNECLLPNYCN

GRCQNFIGGYNCTSCPRGKEFDPTRRECVTSAKLISMALGISCGLGFVMLALGATILITKWKRGIQRRIRRAYFK

KNQGLLLEQLIIDENTKDKTRIFSLEELEKATYNFDATRVLGHGGHGTVYKGILSDQRVVAVKMSKIVEQAEIDQ

FVNEVAILSQIIHRNVVKLFGCCLETEVPLLVYEFISNGTLCELLHNDVSAKCLLSWDDRIRIAIETAGALAYLH

SAAAIPIFHRDVKSSNILLDDNFTAKVSDFGASRSIPLDQTHVVTMVQGTFGYLDPEYYNTSQLTGKSDVYSFGV

ILVELLTRKKPILINDVGTKQNLSQCFLEGLQQGVLMEILDSQVLEEAGQEEIDDIASIAQACLKAKGGERPTMK

EVEMRLQFLRTTRLKKCQPISVMDEEIEPFICPKTISSDAQSSFIHTAGFTSEYSTRSYRLEQELSSSVGLPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	410	611	5.1e-45
Ser/Thr pkinase [Pfam ls]	410	683	1.2e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	383	685	6e-41
Pto [L. esculentum]	386	683	6e-51
Rpg1 [Hordeum vulgare]	394	700	1e-31
Rpg1 [Hordeum vulgare]	398	681	3e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	92	114	out -> in
putative TM domain	334	356	in -> out

Report for 4885.m00177

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)