Report for 4887.m00293

 > 4887.m00293, length: 804, copies: 2 

MALLVSFVVFVLAAAHGAVGFLSIDCGLDGNYSSGYKDPDEGITYVPDGTYVDAGENHRVAADRESGRLRSDLTV

RSFPSGVRNCYALPTVAGAKYLVRVIAFYGNYDGKNSSSLQFDLYLGVNYWNTVSADGDEVYEAMFVAWASWAPV

CLVNTGGGTPFVSSVNLRTLGSGVYHPVLAANQSMCLFDRRNMGSNVSILRYPDDPYDRYWWKMRSDPTWKNLST

ASTIEQNDNFVVPLPVMQTAIEASNNDTIIKVTRKDKTAHKCMIFAYLADFQNSQLRQFNITLSDTKPLLYSPPY

LSAGIVDISDWDMPNNGMYTITLEPTSASKLPPMLNAFEIYTLIPSDNPMTFPRDSWDGVKCSNPSDNTSRIISL

DLSNSNLHGPISNNFTLFTALEHLNLAGNQLNGPIPDSLCRKNNTGTFLLSFDSDRDTCNKSIPGINPSPPKSKL

VFVGIVSADVPHSEPELEIAPASRKYHEDGLQRVENRRFTYKELEKITNKFSQCIGQGGFGLVYYGCLEDGTEVA

VKMRSELSSHGLDEFLAEVQSLTKVHHRNLVSLIGYCWEMDHLALVYEYMSQGTLYDHLRGNNGARETLSWRTRV

RVVVEAAQGLDYLHKGCSLPIIHRDVKTQNILLGQNLQAKIADFGLCKTYLSDTQTHISVAPAGSAGYMDPEYYH

TGRLTESSDVYSFGVVLLEIVTGESPMLPGLGHVVQRVKKKIDAGNISLVADARLIGAYDVSSMWKVVDIALLCT

ADIGAHRPTMAAVVVQLKESLALEEARADSGFKGSIGTLSDTTISTSTFGPSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	371	394	4.4
LRR [Pfam ls]	395	418	0.71
Ser/Thr pkinase [Pfam fs]	499	701	6.3e-45
Ser/Thr pkinase [Pfam ls]	499	767	7.1e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	371	394	0.17
LRR [sensitive, ls]	371	394	4.4
LRR [sensitive, ls]	395	418	0.028
LRR [sensitive, ls]	395	418	0.71

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	350	767	3e-42
Pto [L. esculentum]	479	776	1e-52
Rpg1 [Hordeum vulgare]	485	767	7e-34
Rpg1 [Hordeum vulgare]	489	767	6e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	2	24	in -> out

Report for 4887.m00293

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)