Report for 4901.m00102

 > 4901.m00102, length: 526, copies: 1 

MGCFSCFDSPAEEQLNPKVGGPYGGGSSSSAAAAAYGGGGGSSAGRHGERGGGYPDLHHHHQQQQLPMAAPRVEK

LSAGAEKTRVKSNAILREPSAPKDANGNVISAQTFTFRELATATRNFRPECFLGEGGFGRVYKGRLESTGQVVAI

KQLNRDGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMHFGSLEDHLHDLPPDKEALDWNTRMK

IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDESFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT

GQLTVKSDVYSFGVVLLELITGRRAIDSTRPHGEQNLVSWARPLFNDRRKLPKMADPRLEGRYPMRGLYQALAVA

SMCIQSEAASRPLIADVVTALSYLASQSYDPNAAHASRKPGGDQRSKVGENGRVVSRNDEASSSGHKSPNKDRED

SPKEPPGILNKDFDRERMVAEAKMWGDRERMVAEAKMWGDRERMVAEAKMWGENWRDKRRAIENGQGSLDSPTEN

G

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	122	353	8.9e-53
Ser/Thr pkinase [Pfam ls]	122	399	2.2e-51

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	102	406	1e-30
FLS2 [A.thaliana]	103	403	1e-28
Pto [L. esculentum]	103	398	3e-57
Rpg1 [Hordeum vulgare]	110	393	3e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4901.m00102

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)