Report for 4914.m00067

 > 4914.m00067, length: 741, copies: 1 

MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPC

GFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDPDILCNCFVRDLH

VWPLDIFFNWKYFMMTEVTGREDYQRKRYRNDERSSQRAPDSEFKRDAIDSEKNPRFREKGRPAVIEIMKIVEEL

LLPALAADLTSRLVSLLIRSYRSRATTGVVEDDDLEKLQLLLLELHAAVDEGQGRHVTSQRLLLWLRELTQSMYR

GYYVLDTFRYRSVSIQAQQQDDARGAAAKRLRTSAGAAVRLVLGSSSRDDDDSSRALARALAHLQAVLQNVTPFL

QMLGTYRRVPRRVSVDTERCVPIGRHVEKQRIVAFLLKEDEAAAHVVGVLPIVGPRGTGKSTLIHDASHDARVRA

HFAVIERFGLDEVLLPLHAAGAGAAAATDDTSSRSLEDHRIYLDAVHNIVRQERFARNRSLLILEDAPAVIEFAE

TAWVLPMAHGSKVVVTSEYDQTKAGLGATEEAIRTKKMSKEEYWYHFKALAFRGAANDPAGPAHPALAATAKEIA

SVLNGSFLGMHILIALMRSDPRECFWRAVLQSLVDLCRSSNSKRIKADMGYVQEFALIGRIALKLVLPMRLTLRS

CSITKQGGDPQLGPELNRVAGGIAYSCRSDDSGCVDVILCRSRIPPYEIYKLSCVMEEEVHLERAS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	389	677	2.4e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	260	632	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
RNA recognition motif. (a.k.a. RRM, RBD, or	36	107	4.4e-14

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4914.m00067

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)