Report for 4916.m00074

 > 4916.m00074, length: 558, copies: 1 

MVTCSPENLVTGLEAPSQNLSGLLSASIGNLTNLEIVLLQNNNINGPIPEEIGRLTKLKTLDLSSNHFSGGIPNS

VGHLESLQYLRLNNNTLSGAYPSSSANLSQLVFLDLSYNNLSGPVPGSLARTFNIVGNPLICAAGTEHDCYGTLP

MPMSYSLNNTQGTLMPAKSKSHKVAIAFGSTIGCISFLIPVMGLLFWWRHRRNHQILFDVDEQHTENVNLGNVKR

FQFRELQVATENFSNKNILGKGGFGNVYRGKLPDGTVVAVKRLKDGNAAGGQAQFQTEVEMISLALHRNLLRLYG

FCMTATERLLVYPYMSNGSVALRLKGKPPLDWITRQRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEA

IVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQTALEFGKSSNQKGAML

DWVKKMHQEKKLDVLVDKGLRSNYDRVELEEMVQVALLCTQYLPGHRPRMSEVVRMLEGDGLAERWEASQRADSH

KFKVPEFTFGRCYSDLTDDSSLLVQAVELSGPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	33	56	2
LRR [Pfam ls]	57	80	0.027
LRR [Pfam ls]	81	104	1.5
LRR [Pfam ls]	105	128	0.73
Ser/Thr pkinase [Pfam fs]	238	435	1.4e-47
Ser/Thr pkinase [Pfam ls]	238	509	1.6e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	33	56	0.095
LRR [sensitive, ls]	33	56	2
LRR [sensitive, ls]	57	80	0.0013
LRR [sensitive, ls]	57	80	0.027
LRR [sensitive, ls]	81	104	0.074
LRR [sensitive, ls]	81	104	1.5
LRR [sensitive, ls]	105	128	0.035
LRR [sensitive, ls]	105	128	0.73

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	2	189	3e-21
FLS2 [A.thaliana]	5	507	1e-54
FLS2 [A.thaliana]	8	126	2e-15
FLS2 [A.thaliana]	10	176	7e-16
FLS2 [A.thaliana]	10	120	2e-15
FLS2 [A.thaliana]	10	121	4e-12
Xa21 [O. sativa]	10	320	2e-25
Xa21 [O. sativa]	10	126	6e-21
Xa21 [O. sativa]	10	121	2e-13
Xa21 [O. sativa]	10	130	2e-11
Cf-9 [L. pimpinellifolium]	13	121	5e-14
CLV2 [A. thaliana]	13	125	2e-11
FLS2 [A.thaliana]	13	156	1e-17
FLS2 [A.thaliana]	13	161	1e-14
Xa21 [O. sativa]	13	187	6e-19
FLS2 [A.thaliana]	15	126	2e-13
FLS2 [A.thaliana]	17	124	9e-16
Cf-9 [L. pimpinellifolium]	19	131	4e-12
FLS2 [A.thaliana]	19	124	2e-14
CLV2 [A. thaliana]	20	130	9e-13
Xa21 [O. sativa]	22	164	1e-13
CLV2 [A. thaliana]	39	166	5e-12
Rpg1 [Hordeum vulgare]	219	531	3e-35
Pto [L. esculentum]	225	508	6e-46
Rpg1 [Hordeum vulgare]	231	534	1e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	176	198	in -> out

Report for 4916.m00074

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)