Report for 4922.m00214

 > 4922.m00214, length: 976, copies: 2 

METLSSVTNIVVGKLFALLEKKYEQWRGLEDSIGFIKRELRVIHGFLHDQLPRDRNGEDPPISAVQATCIDELRD

LAHDIEDCLDRFLPCAACERDSSFLRRLAADSRFAGEVERLKSRLEEAHERRANYGVNGVAGSAAAAGGSSSGSA

NTTDYMAQSCGLVGINVPRQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQFDGRAWVV

ASKHRDDTMGLLSALLGQIRQEDDQRFNQIPQDDEQRFQLQSQVQADIRQHLNAKRYLLVFDDIEEKQWNCIKST

FPTETRSRVLVTTTIKPVANACSHGTGSVYNMRTLNVNHSKDLLQSVLKEYSPELELDLPSILEKCDGLPLALVS

VGNFLWRERITECYRNQVCCNLGHHIEKEHAFAELRQVLANNYNTLPGHPLKTCLLYTTVFPNGCSIRRSSLIRR

WLAEGYVQCQYPRSSLEVADANLEELMDRNIIRSMDVTNNGRAKNCRAHGIMHEFMLHKSRCDNFIASLHDPDRS

KCRHLFLTQSLTSGNQSYMDCGTNPKGKQPRARSLTIFGNAGEFALDYAKCELLRVLDLEECDDLKDDHVKYIYK

LLHLKYLGLGSTITYIPRKINKGLHCLQTLDLRKTRINTLPVEIIIMPHLAHLFGKIKIREARGLWVLETNKIEK

ILSDKSKLQTLAGFVVDKNSLFPRLMVHMNKLRKVKIWCEPAAERNSSISLISAAIQKFTQAGMDTTGAHSLSLR

SRKFPNRLLCCLEKSYGYLSSLKLQGELSRFPQFITSLCGLTELCLSSTNLNKEDLSNVCTLHHLLYLKLVESDL

QGFIIKNGDFPRMRHLCLVVQNPNLPTVEKGALPHLLSLQLLCKDLVGLSEIKIEYHDYLEEVALDSMVNIETIE

IWENEAKKHPNRPKVLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKSLRCCSG

V

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	145	462	8e-31
NB-ARC [Pfam fs]	190	462	7.1e-33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	727	3e-56
I2 [L. esculentum]	4	530	2e-23
RPM1 [A. thaliana]	5	871	6e-50
Pib [Oryza sativa].	58	340	2e-12
Pi-ta [Oryza sativa]	60	653	3e-43
RPS2 [A. thaliana]	86	653	3e-15
Xa1 [Oryza sativa]	143	632	6e-19
Pib [Oryza sativa].	162	807	3e-53

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4922.m00214

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)