Report for 4931.m00063

 > 4931.m00063, length: 1155, copies: 1 

MAKNMKKMRVQLEKIAKQNKDFNLMPESSSTVQVLYDDRATSPNVEESVIVGRAQDKQRILFYLSDKILTQDFII

LAIYGMGGIGKTTLVQLVFSDTKFREYSLVWVYVSQVFDLNKIESSIISQLPKMDLSMSDSEVAPTNRNILIVLD

DLWENNGFKLDKLKLKLKVRTGAKVIVIVTTRDEDIARRFSNVEPYKLEPLTDGICWNIIKQKSAFEDRGDKERL

EQTGREIARKCGSVALAAQSLGYLLHSKRLDEWESVKDNDIWNESTLEDASSPHHVLASLKLSYVKMQPSLKLCF

GYCAIFPKGQKIVKDDLIHQWISLNFIKPSKTAGDYHDNFILLTMHDLVHDLARSVMFDEIQNDGLQGDTSGRNC

RYALRTEFSKPLETLRALRFMGCSIDNRLHNDSFSSAKYLRLLDLSECSIQRLPDSIGQLKQLRYLNATGVQHET

IPDGITKLLKLMYLSLRGSSGIQALPEFMGEMEDLMYLDLSDCSRIIRLPVSFGKLTKLVHLDLSHCTRVRGVSE

SLESLTNVEYLNLSNCKNIGELPGALGFKKLEKLPTSFGNLNSLMHFDLSHCLQVKGIPEALGGLTNLQVLNLSH

CYNIFENDVYIRRKVEAIGNLKKLQYLNLSDLLNKKCHDKSTYVSFFECINTLSNLEHLDLSHNEYLRSLPDCFG

SLKRLHTLDVSGCSFLDKIPPSIHNIDNLKFLHADTRIYLGKSMFCLLNESSVSLPHFVVQANANGSGSNLVLLQ

DVNPPKLEISSLENVRSINEVQIIKLLEKQRIEELKLEWAKDAVRFVEDIELLGEIIPPTNLMEFEIHGYNCTKF

PAWLMGIAPYLPNLVRLTMMDMPCCISLPPLGQLPNLKELTLEKMKSVTKIDGDFCGGRRPFPRLKKFVMRDMES

LQVWNTIYCSGVDGVSEFMFPILPELSIFRCTKLRLTPCPLRAEKWNIWGSDGVISSWEESAADIIASCSSPLVT

TLSINCKVSLHEWRLLHHLPDLKGLIINDCNDWTISAEIIRALSSLESLTLERWYNQAQLPNWLGQLVSLKELKI

NRFEMNESQEDIKHLMSLQKLCLHRCTSMTKLPKWVGDLVSLQKLEILSCPDLKYLPESMGCLTSLKKLNISFCD

DIESLPEGIEKLCKLEYISMSGCPKLVPIR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	34	332	5.3e-36
NB-ARC [Pfam ls]	34	332	4.6e-35
LRR [Pfam ls]	414	436	0.032
LRR [Pfam ls]	484	507	1.8
LRR [Pfam ls]	508	531	0.14
LRR [Pfam ls]	532	555	0.56
LRR [Pfam ls]	568	591	1
LRR [Pfam fs]	655	678	4e-05
LRR [Pfam ls]	655	678	0.0007
LRR [Pfam ls]	679	702	5.1
LRR [Pfam ls]	1115	1138	0.69

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	389	413	3.1
LRR [sensitive, ls]	389	413	34
LRR [sensitive, ls]	414	436	0.0029
LRR [sensitive, ls]	414	436	0.032
LRR [sensitive, ls]	460	483	5.3
LRR [sensitive, ls]	460	483	58
LRR [sensitive, ls]	484	507	0.17
LRR [sensitive, ls]	484	507	1.8
LRR [sensitive, ls]	508	531	0.013
LRR [sensitive, ls]	508	531	0.14
LRR [sensitive, ls]	532	555	0.051
LRR [sensitive, ls]	532	555	0.56
LRR [sensitive, ls]	568	591	0.093
LRR [sensitive, ls]	568	591	1
LRR [sensitive, ls]	592	622	0.79
LRR [sensitive, ls]	592	622	8.6
LRR [sensitive, ls]	655	678	6.4e-05
LRR [sensitive, ls]	655	678	0.0007
LRR [sensitive, ls]	679	702	0.47
LRR [sensitive, ls]	679	702	5.1
LRR [sensitive, ls]	861	885	3.9
LRR [sensitive, ls]	861	885	42
LRR [sensitive, ls]	1067	1090	1.4
LRR [sensitive, ls]	1067	1090	15
LRR [sensitive, ls]	1091	1114	4.7
LRR [sensitive, ls]	1091	1114	51
LRR [sensitive, ls]	1115	1138	0.063
LRR [sensitive, ls]	1115	1138	0.69

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	694	4e-31
RPS2 [A. thaliana]	3	695	3e-32
Xa1 [Oryza sativa]	41	1148	1e-41
I2 [L. esculentum]	46	1154	2e-49
Pib [Oryza sativa].	46	464	2e-24
Pi-ta [Oryza sativa]	50	606	5e-12
RPM1 [A. thaliana]	74	708	3e-31
N [N. glutinosa]	75	708	2e-30
RPP5 [A. thaliana]	75	713	5e-15
CLV2 [A. thaliana]	335	746	4e-13
RPP5 [A. thaliana]	364	695	3e-13
FLS2 [A.thaliana]	408	707	3e-13
Xa21 [O. sativa]	408	704	9e-14
Xa21 [O. sativa]	408	695	4e-11
RPP5 [A. thaliana]	412	704	9e-12
CLV2 [A. thaliana]	415	707	4e-14
FLS2 [A.thaliana]	415	707	4e-15
FLS2 [A.thaliana]	418	717	1e-12
RPP5 [A. thaliana]	421	708	5e-13
Xa21 [O. sativa]	428	717	8e-13
FLS2 [A.thaliana]	440	707	3e-12
Xa1 [Oryza sativa]	461	1153	1e-10
RPP5 [A. thaliana]	525	1131	1e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	73	95	in -> out

Report for 4931.m00063

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)