Report for 4931.m00069

 > 4931.m00069, length: 1214, copies: 1 

MAAAAIGGMLASAAIKETTRKLGSAIGGEIKLHRDFRRDLECFRNTLESIEAVMEDAEKRSIKEKTVQLWLNRLK

NASYDICDMLEEFEAKTATPAARMLSRKLFHHPKITKFTMVHKMKELRLELKDITDQYHNFGFKQGSTFSEQHVP

DKRETSPKEYEAFIVGRTEQKNFILSCLFDNIKDKIIILPIYGIGGIGKTTFAKMVFNDTRLNDYSKVWVYVSQA

FDLNKIRSSIMSKLSKEESQLSNQTNPAEPFGDKKIMVVLDDLWEIDQSELDRLRAILVNDVGIGSKVIVVVTTR

EKEIANKFCTVAPFELPPLTDDMCWTIIKQKVEFDTRPDKDQLEQVGREIALKCGGVALAAQALGYMLRSMTVNR

WNTVKNSDIWNENNSEDRSNQHHNVMASLMLSCNNMSPYLRLCFAYCALFAKGQKIVKDDLIYQWISLGFVEKQG

IFSIWENGENYVCHLMGMSFLQYSKSPSIVQVHQEDVTLLTMHDLVHDLARYVMVDEILDASKQGNITGRCRCRF

ALLNDCTKPLNSLTHSPTQVRAVRYLENEENVLRDASFSSAKYMRVLDLSGCSIQKLPDSIGHLKQLRYLKALGI

KDKMIPNCITKLSKLIFLSISGSSAILTLPKSIGEMESLMYIDLSGCSGLKELPESFGKLKKLIHLDLSNCSNVT

GVSESLESLINLKYLNLSYCRNIGQLPEVMGNLSKLVYLNLSSCSYMKGRLETEVLGTLTKLEYLNLSTEHFYTE

RLAQGLNSLINLKYLNLSGSLNYLGSSIDISFLGCLNNLEHLVLSKNIYLNGVVLPDCFDTLKKLHTLDLSDCPL

LSSLPASIGKADSLKFVNLNGSDLSKVPQWNKNLLTLPRFVVQPNDDGSSSNLVLLNDVNPPNLQIRCLENVRSV

KEVQKIELIEKQRIKELELHWTQHVKRSMEDIDLLRELVPPRSLKKFRMEGYKDTKYPSWLMDISLYLPNLIQIT

MAQMPKCVRLPPLGQLPNLEELCLERMKSVVKIDEDFCGGPGPFPRLKKFTIEGMPSLEVWNTMYSCDEDSVSEF

MFPNLCELEISNCPKLQLTPCPPRAKKWTIVRSDGIISSWAGNAPHTSTSCSTPLVSSLVVQQCDSPLREWRLLH

HLPALNYLKIQYFGDPTISAEIIGALSTLQSLALEGIYSHQPQLPDWLGHLRSLKELKIKFFELDIITAVGGRPR

LSPGIEHLRLSKPE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	148	451	7.9e-37
NB-ARC [Pfam ls]	148	451	6.1e-36
LRR [Pfam ls]	568	590	0.013
LRR [Pfam ls]	638	661	0.11
LRR [Pfam ls]	662	685	0.82
LRR [Pfam ls]	686	709	0.037
LRR [Pfam ls]	710	735	3.9
LRR [Pfam ls]	788	813	5.2
LRR [Pfam ls]	814	837	1.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	568	590	0.0012
LRR [sensitive, ls]	568	590	0.013
LRR [sensitive, ls]	614	637	2.7
LRR [sensitive, ls]	614	637	29
LRR [sensitive, ls]	638	661	0.01
LRR [sensitive, ls]	638	661	0.11
LRR [sensitive, ls]	662	685	0.075
LRR [sensitive, ls]	662	685	0.82
LRR [sensitive, ls]	686	709	0.0034
LRR [sensitive, ls]	686	709	0.037
LRR [sensitive, ls]	710	735	0.36
LRR [sensitive, ls]	710	735	3.9
LRR [sensitive, ls]	761	787	1.6
LRR [sensitive, ls]	761	787	18
LRR [sensitive, ls]	788	813	0.47
LRR [sensitive, ls]	788	813	5.2
LRR [sensitive, ls]	814	837	0.12
LRR [sensitive, ls]	814	837	1.3
LRR [sensitive, ls]	838	860	1.5
LRR [sensitive, ls]	838	860	16
LRR [sensitive, ls]	993	1016	3.9
LRR [sensitive, ls]	993	1016	43
LRR [sensitive, ls]	1054	1079	7.4
LRR [sensitive, ls]	1054	1079	81

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	5	846	2e-58
RPM1 [A. thaliana]	10	770	1e-30
Mla1 [Hordeum vulgare].	10	716	2e-44
Pi-ta [Oryza sativa]	64	742	1e-17
Xa1 [Oryza sativa]	106	743	2e-48
Pib [Oryza sativa].	161	921	6e-26
RPS2 [A. thaliana]	164	843	2e-28
N [N. glutinosa]	188	853	1e-26
RPP5 [A. thaliana]	191	1070	5e-18
FLS2 [A.thaliana]	541	863	2e-13
RPP5 [A. thaliana]	566	743	4e-13
RPP5 [A. thaliana]	566	857	2e-11
N [N. glutinosa]	569	855	7e-16
CLV2 [A. thaliana]	572	855	2e-11
FLS2 [A.thaliana]	581	911	5e-11
Xa21 [O. sativa]	589	892	2e-14
Xa21 [O. sativa]	604	845	1e-16
I2 [L. esculentum]	805	1068	8e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	38	60

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4931.m00069

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)