Report for 4944.m00174

 > 4944.m00174, length: 607, copies: 1 

MKPLSAQNSRELFFNRIFGSKDYCPSYLEEVSCKILKKCGGLPLAIVTVASILACQPTRLKEEWEYIQSSLATNK

FARKSTLEDMMQILELSYKSLPHHLKACFLYLGAYPEDCVISKVDLIKRWVAEGFVSHSPGQDAWVVAESYFNEL

VNRSMIQLPYQGYYNEVSHCKVHDMMLDMILMRCKEDNFISVIQDPRAAIEVQDKIRRLTIDLNGAMGDTMDMNI

TRKVSQVRSLGVFGGSKWIPPLLEFKFLRVLFLEFFLREMIIDLTGINQLSQLRYLKVECKECLMDVSSLENIDA

LGELTSLADMSLHCGKQDTKSTTPGWMTALSCSIEKLGNLKGLYVRSNSPSCCADAMSSWFSPPFLNLEKLDLLD

WTFSKVPRWIGQLHSLRELALGGKKILQEDVSMIGTMLPFLTHLSLRIVTCNIAVKESRIMIEGSIGFAALRFFC

FDSNRMSHLEFGVGAMPQLKRLLLALDPWEWDEATPVGLKHLLYLEEIRVLTASTAVASAGSESMNGKSALVKGV

FHDAANALQSRPAFTVLPRIRSLSDHVNCCKINMETVACILVIGVPPNVTTYMGQESDHHGIFFHGFVGLNVSGF

MGENVQE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	24	136	5e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	1	394	1e-14
Mla1 [Hordeum vulgare].	1	476	3e-50
Pib [Oryza sativa].	1	409	5e-35
Pi-ta [Oryza sativa]	3	505	2e-59
RPS2 [A. thaliana]	4	147	2e-11
RPM1 [A. thaliana]	12	504	1e-21
Xa1 [Oryza sativa]	12	287	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 4944.m00174

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)