Report for 4963.m00149

 > 4963.m00149, length: 514, copies: 1 

MIGAAVARWTGAATNDVGGKWVVLAGYARGHGCRWRDGKRVDGGLPCPSVMVAVDAIMGIKLEYGIKKNWTGDPC

FPAQLAWDGIKCSSVSGNNTARIIYFFGSDGDMCNKTINPPPSRKKVKGGAIIAIAVVVPVSAIVLILAYLIWRQ

KRKPKILSYNLYFLEPVSTDDPPREPELDIAPASRNNHGGTLLKVENRQFTYKELEKFTNNFERFIGQGGFGPVF

YGCLEDGIEVAVKIRSESSSHGLDQFFAEVQSLTKVHHRNLVSLVGYCWEKGHLALVYEYMARGSLCDHLRGNNG

VSDSLNWRTRVRVVVEAAQGLDYLHKGCSLPIIHGDVKTSNILLSQNLQAKIADFGLSKSYVSETQTHISVTPAG

SAGYMDPEYFHTGRLTESSDVYSFGIVLLEIATGESPILPGLGHIVQRVKNKVASGNISLVVDARLGDAYDVSSM

WKVVDTALLCTTDIGAQRPTMAAVVAQLKESLALEQTCEYSALSGTTGTSDTTVSLANVGPLAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	210	412	2.9e-47
Ser/Thr pkinase [Pfam ls]	210	480	3.3e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	77	478	3e-34
Pto [L. esculentum]	196	487	1e-53
Rpg1 [Hordeum vulgare]	196	478	7e-34
Rpg1 [Hordeum vulgare]	199	410	6e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	126	148	in -> out

Report for 4963.m00149

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)