Report for 4963.m00153

 > 4963.m00153, length: 682, copies: 1 

MSGAAAIATGEGGPLVAVGLGGGNDLHNGDAAVVLGKTWCWASRYPGDQYDRFWWQLGYSSPTWKNLSTVSAITQ

DSIYTVLLTIIQTAVEAVGNNTMLNITWQDQTPRGRGLKFFMYFADFQNSQLRQFNVSFNDVEPYQYSPPYLTTG

VLYNSGWSTATDGNYNISLVPTAASKLPPMINALEIYTLISHDNPTTFPVDFETIMAIKLEYGIKKNWMGDPCFP

EKFAWEGVKCSNSSSNTARIISLNLSCNQLNGPVPDSLRKNNTGSFIFSFNSDGNMCNKPIIVPSPPGKRSNRAA

TLAILIVVPATVIVVLVLVFLIWRQKRNSNYSTEDPTRDRSNQLENSLEKSQNHGDVLQIVENRQFTYIELEKVT

NKFENHIGQGGFGPVYYGCLEDNTEVAVKMRSELSSHGLDEFFAEVQNLTKVHHRNLVSLIGYCWERDHLALVYE

YMAQGSICDRLRGNIFVENQHASHYSILTITFHIYEGLDYLHKGCSLPIIHRDVKTSNILLGKNLQAKIADFGLS

KTYLGETQTHISVTPAGTAGYIDPEYYQTGRFTESSDVYSFGIVLLEIATGEPPIISGQGHIVQRVKNKIVAGDI

SLIADARLDGAYDISSMWKVVDTALQCTVDVVAQRPTMATVVAQLKESLALEESREDSGFMGSTSTVSDNTFSTS

RFGPSAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	376	579	3e-43
Ser/Thr pkinase [Pfam ls]	376	647	1.7e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	238	579	2e-36
Pto [L. esculentum]	356	654	6e-47
Rpg1 [Hordeum vulgare]	360	657	4e-32
Rpg1 [Hordeum vulgare]	365	577	1e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	301	323	out -> in

Report for 4963.m00153

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)